Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
PCDHGA3Q9Y5H0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 OR10J6P-201ENST00000289731 930 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 U3.3-201ENST00000362986 216 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 RNA5SP123-201ENST00000363244 119 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 OR1L6-202ENST00000373684 1044 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 ENSAP1-201ENST00000392855 326 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 PPIAP9-201ENST00000403866 498 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR1250-201ENST00000408098 113 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 MTATP6P27-201ENST00000416987 621 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 Z97055.1-201ENST00000419730 712 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 USP9YP29-201ENST00000445112 563 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 Z80107.2-201ENST00000445127 392 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 NOP56P2-201ENST00000447491 769 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 PLGLA-201ENST00000465668 449 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC083982.1-201ENST00000485679 344 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 CDC42P4-201ENST00000510507 563 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC022447.1-201ENST00000515358 464 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC012400.1-201ENST00000518452 381 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC005771.1-201ENST00000585581 349 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC011487.3-201ENST00000593607 453 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC025165.5-201ENST00000602802 578 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 BBIP1P1-201ENST00000602999 279 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC115621.1-201ENST00000604653 858 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC108479.2-201ENST00000617314 601 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AL139089.1-201ENST00000620372 975 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC000123.2-201ENST00000623124 461 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC091953.3-201ENST00000623220 236 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 AC135068.12-201ENST00000637370 931 ntBASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA3Q9Y5H0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL022578.1-201ENST00000439330 1433 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL731566.1-201ENST00000620490 1937 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC087190.4-201ENST00000574616 8334 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU5F-6P-201ENST00000362979 116 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 RN7SKP224-201ENST00000364140 325 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU6-1119P-201ENST00000384349 108 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 SNORD56.6-201ENST00000384569 71 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 RPS3AP23-201ENST00000401762 784 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 DHFRP6-201ENST00000401776 268 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 MIR1182-201ENST00000408363 97 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL031779.1-201ENST00000415663 330 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC004448.2-201ENST00000422360 586 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC104837.2-201ENST00000427236 424 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC109583.1-201ENST00000432156 268 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 RPS3AP54-201ENST00000435535 734 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 KNOP1P3-201ENST00000446933 426 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 BX276092.4-201ENST00000452056 248 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms