Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CEACAMP6-201ENST00000452007 574 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SNRPGP9-201ENST00000456025 225 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RN7SL517P-201ENST00000462240 305 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RPL9P33-201ENST00000484311 566 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 MYL12BP2-201ENST00000503948 512 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 ATP1B1P1-201ENST00000509767 915 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 OR5M2P-201ENST00000529003 936 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC087883.1-201ENST00000551882 391 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC136619.2-201ENST00000563361 631 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC087481.2-201ENST00000565492 330 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC012414.6-201ENST00000568241 401 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RN7SL652P-201ENST00000577769 300 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 MIR5699-201ENST00000578903 90 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 MTND1P15-201ENST00000579262 949 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC209154.1-201ENST00000582156 337 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC008507.1-201ENST00000587506 734 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 EIF1P6-201ENST00000600054 334 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC008498.1-201ENST00000613012 531 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC019226.1-201ENST00000625666 515 ntBASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTDP1Q9Y5B0 AC095050.2-201ENST00000510748 1458 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC109315.1-201ENST00000584143 1347 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 Y_RNA.311-201ENST00000365068 96 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 RAP1BP3-201ENST00000407180 549 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL161449.1-201ENST00000414531 1199 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 ATG4AP1-201ENST00000416893 538 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 MTCYBP38-201ENST00000417160 1123 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 USP9YP29-201ENST00000445112 563 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL162591.2-201ENST00000449634 317 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 RPL23AP12-201ENST00000467573 473 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC104763.1-201ENST00000475274 360 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 VPS26AP1-201ENST00000483197 979 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC090071.1-201ENST00000507713 644 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC105031.1-201ENST00000518550 476 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 IGJP1-201ENST00000522682 475 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL110118.1-201ENST00000553543 400 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 MIR4697-201ENST00000582977 78 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL357078.3-201ENST00000607528 618 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 Z99129.1-201ENST00000612510 255 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 AL731566.2-201ENST00000618971 317 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 Z99496.1-201ENST00000469424 1477 ntBASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTDP1Q9Y5B0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 DHX40P1-201ENST00000588725 1412 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC027290.2-201ENST00000623210 18662 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 Z98745.1-201ENST00000402553 494 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms