Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OR4C2P-201ENST00000530855 1064 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 AC005000.2-201ENST00000605468 310 ntBASIC3.12□□□□□ -1.91
CCDC88CQ9P219 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC88CQ9P219 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 MTCO3P31-201ENST00000405526 789 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 RN7SKP111-201ENST00000410349 271 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 TXNP1-201ENST00000441872 371 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AL121594.4-201ENST00000556211 1196 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 AL356490.1-201ENST00000623079 479 ntBASIC3.11□□□□□ -1.91
CCDC88CQ9P219 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC88CQ9P219 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RNA5SP374-201ENST00000362939 125 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC009237.5-201ENST00000414271 501 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC025750.2-201ENST00000442609 450 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 TRBV8-2-201ENST00000475637 270 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 Vault.1-201ENST00000516474 102 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC025423.2-201ENST00000537570 439 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL135786.2-201ENST00000608422 615 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL592437.2-201ENST00000421655 2434 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 GNG5P1-201ENST00000255500 204 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 XIAPP3-201ENST00000312918 795 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 SKINT1L-201ENST00000401057 817 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 EEF1A1P41-201ENST00000414667 207 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 OR1AA1P-201ENST00000419597 916 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL159169.1-201ENST00000421119 127 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RPL7P44-201ENST00000424827 742 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 S100A11P1-201ENST00000477525 312 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RN7SKP34-201ENST00000516142 244 ntBASIC3.1□□□□□ -1.91
CCDC88CQ9P219 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC88CQ9P219 RPL5P19-201ENST00000404228 893 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC021146.5-201ENST00000503544 545 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC007424.1-203ENST00000554613 687 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 AC024341.1-201ENST00000526444 1552 ntBASIC3.09□□□□□ -1.91
CCDC88CQ9P219 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC88CQ9P219 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC88CQ9P219 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms