Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC007497.1-201ENST00000610421 561 ntBASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 AC140134.1-201ENST00000511830 3544 ntBASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM7Q9NR12 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 MTND5P17-201ENST00000418405 1603 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 Y_RNA.296-201ENST00000364930 108 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 SNORD116-23-201ENST00000384645 92 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 MTCO3P40-201ENST00000392516 676 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 Y_RNA.598-201ENST00000410480 95 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ELOCP14-201ENST00000428070 331 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 CBX1P4-201ENST00000439415 457 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ELOCP7-201ENST00000439968 331 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL118496.2-201ENST00000448300 230 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 MRPS33P2-201ENST00000507850 322 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC022884.2-201ENST00000578535 580 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC115286.1-201ENST00000604298 434 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AL592295.2-201ENST00000612578 206 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC010133.1-201ENST00000615809 842 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC093591.3-201ENST00000634516 308 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 MTND1P37-201ENST00000636562 264 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 AC092326.2-201ENST00000624772 1561 ntBASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM7Q9NR12 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC046144.1-201ENST00000478559 1853 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 XGY1-201ENST00000381172 446 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 CALM2P3-201ENST00000400429 449 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RPS24P12-201ENST00000402084 394 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RN7SKP285-201ENST00000410137 318 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC073614.1-201ENST00000438690 650 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RPL7AP61-201ENST00000443410 636 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 USP9YP12-201ENST00000450481 570 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RNU6-1218P-201ENST00000458990 108 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 RN7SL319P-201ENST00000480656 221 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC108078.1-201ENST00000508073 725 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC103710.4-201ENST00000609301 899 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC103710.1-201ENST00000610003 901 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC023509.5-201ENST00000617434 807 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC234782.5-201ENST00000617723 324 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AC009033.1-201ENST00000624279 431 ntBASIC5.65□□□□□ -1.5
PDLIM7Q9NR12 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms