Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC079776.3-201ENST00000450665 370 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 MRPL35P4-201ENST00000453682 566 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 FGF7P3-201ENST00000454645 303 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AL161747.1-201ENST00000480068 358 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 DYNLL1P6-201ENST00000503440 264 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC008958.1-201ENST00000511047 682 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 RNA5SP519-201ENST00000516480 119 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 RNU5A-4P-201ENST00000516588 111 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AL354943.1-201ENST00000572103 781 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 BPTFP1-201ENST00000579209 492 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 PSMA6P4-201ENST00000603247 718 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC114878.2-201ENST00000604863 1251 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 MIR4727-201ENST00000622232 55 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC004777.1-201ENST00000624317 287 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC104454.1-201ENST00000421341 1401 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC119744.1-201ENST00000454746 1715 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC022893.2-201ENST00000564832 3296 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 MTND4P26-201ENST00000415971 1359 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC096656.1-201ENST00000623826 1364 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 FAM133CP-201ENST00000332869 704 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 RNA5SP366-201ENST00000365454 123 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC234782.4-201ENST00000417646 1048 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 RPL7P4-203ENST00000430239 730 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 RPS6P12-201ENST00000432491 726 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC009220.1-201ENST00000451614 275 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC009963.2-201ENST00000453431 138 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 ATG12P2-201ENST00000456830 416 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 RPL36AP13-201ENST00000457490 317 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC011979.1-201ENST00000472300 483 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 S100A11P1-201ENST00000477525 312 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC041039.1-201ENST00000485656 536 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC005912.1-201ENST00000495392 255 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 RPL5P23-201ENST00000496040 868 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 OR5H4P-201ENST00000510851 923 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 KCTD9P2-201ENST00000512203 1013 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AC118465.1-201ENST00000513820 1271 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 SNORD116-26-201ENST00000516006 96 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 IGKV2-38-201ENST00000517443 247 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 COX6B1P6-201ENST00000522347 255 ntBASIC4.29□□□□□ -1.72
PCDH9Q9HC56 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH9Q9HC56 AP000926.4-201ENST00000527351 454 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms