Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MTCYBP28-201ENST00000566728 1132 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 MIR4666A-201ENST00000580160 79 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC006116.5-201ENST00000591936 559 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AP003973.1-201ENST00000604639 691 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC024060.1-201ENST00000607052 494 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AL354760.1-201ENST00000608357 643 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC009237.15-201ENST00000610252 501 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC004825.2-201ENST00000616634 455 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC123767.1-202ENST00000620407 817 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 MIR492-201ENST00000638676 116 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
UBQLN3Q9H347 IQCB2P-201ENST00000401788 1633 ntBASIC3.88□□□□□ -1.79
UBQLN3Q9H347 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC106754.1-201ENST00000562632 1513 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 HMGB1P5-201ENST00000255320 642 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AL079342.2-201ENST00000403367 482 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 MTCO3P31-201ENST00000405526 789 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ZNF602P-201ENST00000405929 924 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RNA5SP36-201ENST00000410197 133 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC073264.1-201ENST00000411508 416 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 MTND2P9-201ENST00000422293 931 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 MTCO2P23-201ENST00000425216 680 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 COX6CP15-201ENST00000426313 211 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RPL21P133-201ENST00000443666 476 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RPS26P56-201ENST00000444468 240 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC068587.1-201ENST00000483613 781 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RPS27AP13-201ENST00000498403 237 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 UBE2V1P12-201ENST00000503954 474 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC025554.1-201ENST00000505641 188 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 KCTD9P2-201ENST00000512203 1013 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC099522.1-202ENST00000514718 367 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RN7SKP21-201ENST00000516503 220 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 RNA5SP135-201ENST00000517019 125 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC012603.1-201ENST00000606424 528 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC064801.1-201ENST00000612025 407 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 CYCSP41-201ENST00000616920 296 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 AC068831.8-201ENST00000620171 435 ntBASIC3.87□□□□□ -1.79
UBQLN3Q9H347 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBQLN3Q9H347 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
UBQLN3Q9H347 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RNA5SP502-201ENST00000362694 119 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RNU6-582P-201ENST00000362989 107 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RNU6-839P-201ENST00000363347 108 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RNU6-1243P-201ENST00000364028 107 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RNA5SP167-201ENST00000365461 116 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBQLN3Q9H347 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
UBQLN3Q9H347 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
UBQLN3Q9H347 RPS26P8-201ENST00000393490 348 ntBASIC3.86□□□□□ -1.79
UBQLN3Q9H347 AL133264.1-201ENST00000407157 562 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms