Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 MTND5P28-201ENST00000438005 1594 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RNU6-1243P-201ENST00000364028 107 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RNA5SP130-201ENST00000364431 114 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 SNORA62-201ENST00000365493 153 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RNU4-6P-201ENST00000410804 122 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 OR8G2P-201ENST00000412796 908 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 PSMA2P3-201ENST00000429685 675 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC010881.1-201ENST00000433830 235 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 BMS1P19-201ENST00000433925 393 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 USP9YP7-201ENST00000436723 430 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RPS29P31-201ENST00000446147 164 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 OR51B8P-201ENST00000449892 769 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 USP9YP32-201ENST00000452432 430 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC146507.1-201ENST00000468335 354 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RPL21P18-201ENST00000469899 480 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 GAPDHP36-201ENST00000480688 918 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC068305.1-201ENST00000497406 726 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 RNU6-488P-201ENST00000515918 99 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC008802.1-201ENST00000519121 791 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC008489.1-201ENST00000524271 483 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 TOMM20P2-201ENST00000540082 421 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 MTCYBP28-201ENST00000566728 1132 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 MIR4504-201ENST00000577413 92 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 YWHAQP7-201ENST00000603536 658 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC120053.1-201ENST00000607706 736 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC078880.5-201ENST00000617845 421 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC068880.4-201ENST00000623082 495 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AL590396.4-201ENST00000636779 956 ntBASIC3.95□□□□□ -1.78
DDX47Q9H0S4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX47Q9H0S4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RNU6-283P-201ENST00000364788 107 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RNU6-468P-201ENST00000384003 109 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC127526.1-201ENST00000417526 366 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 Z97055.1-201ENST00000419730 712 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC092832.1-201ENST00000422934 400 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 HIGD1AP12-201ENST00000427832 281 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC002542.1-201ENST00000440683 193 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RPL23AP33-201ENST00000442301 452 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 NANOGP10-201ENST00000453325 895 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RPL21P11-201ENST00000461458 483 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC108941.1-201ENST00000502853 530 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 SNX5P1-201ENST00000505757 1041 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 HPRT1P1-201ENST00000509498 657 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 USP9YP5-201ENST00000511770 630 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AC093755.1-201ENST00000512950 1023 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 RNU4-60P-201ENST00000517239 135 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 AP003730.1-201ENST00000524605 285 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 OR5AP1P-201ENST00000529730 940 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 CR383656.14-201ENST00000551951 406 ntBASIC3.94□□□□□ -1.78
DDX47Q9H0S4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX47Q9H0S4 MIR3138-201ENST00000585238 82 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms