Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC023813.4-201ENST00000607580 580 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AC087241.4-201ENST00000612441 480 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AC114781.5-201ENST00000615297 108 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 U6atac.1-201ENST00000616025 117 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 VN1R7P-201ENST00000619242 903 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AP000843.1-201ENST00000624880 701 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 MIR4278-201ENST00000636094 69 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.16□□□□□ -1.58
SALL3Q9BXA9 AC073055.1-201ENST00000456901 1621 ntBASIC5.16□□□□□ -1.58
SALL3Q9BXA9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.16□□□□□ -1.58
SALL3Q9BXA9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.16□□□□□ -1.58
SALL3Q9BXA9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SALL3Q9BXA9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 ZNF833P-201ENST00000424938 1494 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 Y_RNA.3-201ENST00000362331 103 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 Y_RNA.192-201ENST00000363977 102 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 snoZ40.1-201ENST00000364540 72 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 MIR1179-201ENST00000408703 91 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC004690.1-201ENST00000418216 328 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC027644.1-201ENST00000419595 298 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 GAPDHP49-201ENST00000421421 961 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AL132765.1-201ENST00000434165 553 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 RPL23AP89-201ENST00000439324 255 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 MTND4P25-201ENST00000441039 533 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC022431.1-201ENST00000450941 438 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 RPL5P13-201ENST00000462840 709 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC091167.1-201ENST00000492017 396 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC112198.1-201ENST00000505369 1220 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC104090.1-201ENST00000506341 1171 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC010285.3-201ENST00000511668 676 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 Y_RNA.695-201ENST00000516715 107 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 OR5G4P-201ENST00000525251 760 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 UBE2NP1-201ENST00000545592 458 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 PSMB7P1-201ENST00000556349 514 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC006362.1-201ENST00000567392 174 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 MIR4277-201ENST00000578298 84 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 RPL26P30-202ENST00000602923 645 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 VN1R74P-201ENST00000613259 503 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 AC105227.2-201ENST00000615075 605 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 ZNF663P-202ENST00000641770 1131 ntBASIC5.15□□□□□ -1.59
SALL3Q9BXA9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SALL3Q9BXA9 MUC2-202ENST00000613187 4845 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC000367.1-201ENST00000452711 1766 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL391994.1-201ENST00000254724 282 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RAP1BP3-201ENST00000407180 549 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RNU2-16P-201ENST00000410712 136 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RPL6P29-201ENST00000414863 865 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC093716.1-201ENST00000435923 377 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 ACTR3P2-201ENST00000439585 1257 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms