Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC025674.1-201ENST00000507074 324 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 HMGB3P15-201ENST00000507326 574 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX3Q99909 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 RN7SKP116-201ENST00000516902 319 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 C1GALT1P3-201ENST00000522049 819 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX3Q99909 OR4C2P-201ENST00000530855 1064 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC009643.1-201ENST00000532030 391 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX3Q99909 AC092747.2-201ENST00000545069 983 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 AC015912.2-201ENST00000571053 181 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC141257.3-201ENST00000572906 215 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 MIR5708-201ENST00000579723 85 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC005412.1-201ENST00000580812 1049 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 MIR5096-201ENST00000583713 70 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 RPL12P25-202ENST00000598100 674 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC113368.1-201ENST00000603736 382 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC024933.1-201ENST00000608472 348 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AP000255.1-201ENST00000610276 676 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 MIR378J-201ENST00000611988 109 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AL592148.2-201ENST00000612210 372 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC104763.3-201ENST00000613765 618 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC233309.1-201ENST00000619522 751 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC104985.3-201ENST00000623479 597 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 AC010608.3-201ENST00000625048 527 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX3Q99909 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 AC005261.4-201ENST00000600047 1385 ntBASIC3.71□□□□□ -1.82
SSX3Q99909 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SSX3Q99909 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX3Q99909 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX3Q99909 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SSX3Q99909 AL355578.1-201ENST00000607405 1328 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 ZNF734P-201ENST00000419494 1534 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 AC139713.2-214ENST00000642059 1811 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 MFSD8-242ENST00000641690 4199 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SSX3Q99909 MIR423-201ENST00000362201 94 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 RNU6-582P-201ENST00000362989 107 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 RNU6-839P-201ENST00000363347 108 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 RNU6-115P-201ENST00000364310 107 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 AL121978.1-201ENST00000402778 359 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SSX3Q99909 RN7SKP56-201ENST00000410513 331 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 JKAMPP1-201ENST00000413804 919 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC013410.2-201ENST00000422627 201 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 RPS12P10-201ENST00000427031 377 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 IFNNP1-201ENST00000429219 553 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC016712.1-201ENST00000431088 378 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 GTF2IP3-201ENST00000433887 494 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 B3GNT2P1-201ENST00000434960 952 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 RPL31P13-201ENST00000484151 370 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC013356.1-201ENST00000489027 564 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 RNU6-885P-201ENST00000516607 104 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 IFITM8P-201ENST00000522529 394 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC138701.1-201ENST00000524329 714 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX3Q99909 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC105129.1-201ENST00000560250 297 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 MIR4277-201ENST00000578298 84 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.7□□□□□ -1.82
SSX3Q99909 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
SSX3Q99909 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX3Q99909 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX3Q99909 AL359757.1-201ENST00000623176 255 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC090506.2-201ENST00000624521 419 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 AC112200.1-201ENST00000625015 234 ntBASIC3.7□□□□□ -1.82
SSX3Q99909 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX3Q99909 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms