Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SNORA70C-201ENST00000384538 135 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
AP1S3Q96PC3 RPL32P35-201ENST00000415214 394 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 RPL29P29-201ENST00000448725 423 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 RPS29P33-201ENST00000456717 146 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 RPL21P104-201ENST00000464143 478 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 NCOR1P1-202ENST00000486162 291 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AL139099.1-201ENST00000497398 403 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 FTH1P21-201ENST00000512179 511 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 RN7SKP282-201ENST00000516824 299 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AC034205.1-201ENST00000520621 638 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AC026333.2-201ENST00000542164 106 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AGGF1P6-201ENST00000569213 976 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AC087499.8-201ENST00000578406 226 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 AL591034.3-201ENST00000605511 685 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 MIR6716-201ENST00000613413 80 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 AC069209.1-201ENST00000619282 651 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.57□□□□□ -2
AP1S3Q96PC3 AC119674.1-212ENST00000641155 993 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 ELL2P4-201ENST00000446870 1376 ntBASIC2.57□□□□□ -2
AP1S3Q96PC3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.57□□□□□ -2
AP1S3Q96PC3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.57□□□□□ -2
AP1S3Q96PC3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
AP1S3Q96PC3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
AP1S3Q96PC3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.56□□□□□ -2
AP1S3Q96PC3 MFSD8-233ENST00000641482 4860 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 RNU6-213P-201ENST00000384051 104 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 SAR1AP2-201ENST00000392696 594 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 SOD2P1-201ENST00000396543 562 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.56□□□□□ -2
AP1S3Q96PC3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.56□□□□□ -2
AP1S3Q96PC3 MRPL50P2-201ENST00000416821 482 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 RPL21P40-201ENST00000428586 483 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 GOT2P5-201ENST00000433995 546 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC006326.1-201ENST00000445465 787 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 CCRL1P1-201ENST00000449542 1053 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 RNU7-27P-201ENST00000459281 62 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC006483.1-201ENST00000487308 313 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 AC111000.5-201ENST00000506559 1178 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 SNORA31.26-201ENST00000517250 137 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC104027.1-201ENST00000521887 300 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
AP1S3Q96PC3 MIR5187-201ENST00000583479 76 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.56□□□□□ -2
AP1S3Q96PC3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.56□□□□□ -2
AP1S3Q96PC3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.56□□□□□ -2
AP1S3Q96PC3 HMGN2P28-201ENST00000606102 262 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 OR2BH1P-201ENST00000608850 864 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
AP1S3Q96PC3 AC231759.1-201ENST00000616455 597 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 MIR6730-201ENST00000622213 67 ntBASIC2.56□□□□□ -2
AP1S3Q96PC3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.56□□□□□ -2
AP1S3Q96PC3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.56□□□□□ -2
AP1S3Q96PC3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
AP1S3Q96PC3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
AP1S3Q96PC3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 RPL21P3-201ENST00000395517 478 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 RPL5P18-201ENST00000406671 891 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
AP1S3Q96PC3 RN7SKP156-201ENST00000410308 342 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.55□□□□□ -2
AP1S3Q96PC3 SDCBPP2-201ENST00000424643 885 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 OR8F1P-201ENST00000425243 930 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 RPL21P112-201ENST00000434403 463 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 OR4C10P-201ENST00000434991 931 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 SETP8-201ENST00000435341 628 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.55□□□□□ -2
AP1S3Q96PC3 AC006994.1-201ENST00000438212 839 ntBASIC2.55□□□□□ -2
AP1S3Q96PC3 ISCA1P2-201ENST00000438679 421 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms