Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RPRD1AQ96P16 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.84□□□□□ -1.8
RPRD1AQ96P16 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 MIR153-1-201ENST00000384914 90 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC007066.1-201ENST00000392902 381 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 PTMAP5-201ENST00000393073 333 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AL356057.1-202ENST00000402263 756 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 MTND3P20-201ENST00000407663 186 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AF228730.2-201ENST00000438784 848 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC092809.1-201ENST00000441469 474 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 Z95327.1-201ENST00000446082 482 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC239367.2-201ENST00000447309 705 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 HMGN2P21-201ENST00000447764 270 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 DNAJC19P1-201ENST00000455312 319 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 TRBV8-2-201ENST00000475637 270 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 TRMT10BP1-201ENST00000519377 943 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 OR7E13P-201ENST00000526052 910 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 NTAN1P1-201ENST00000603150 646 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 Z82195.1-201ENST00000604558 398 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 BRDTP1-201ENST00000605735 677 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 ZNF285B-201ENST00000561698 1767 ntBASIC3.83□□□□□ -1.8
RPRD1AQ96P16 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPRD1AQ96P16 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL122126.1-201ENST00000546905 1318 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RPL21P17-201ENST00000397467 475 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 PTMAP2-201ENST00000397627 327 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RPL7P60-201ENST00000397636 735 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RNU2-37P-201ENST00000410695 177 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RAB9AP3-201ENST00000412737 573 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL035423.1-201ENST00000420331 213 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC008065.1-201ENST00000428525 348 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL513321.1-201ENST00000441175 761 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RPS7P5-201ENST00000441482 581 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RAB9AP1-201ENST00000449393 573 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RPL7P15-201ENST00000461190 712 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RN7SKP283-201ENST00000517197 270 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 PAICSP4-201ENST00000517543 1253 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC139103.1-201ENST00000534696 1030 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL121766.1-201ENST00000547436 487 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC233266.2-201ENST00000567067 528 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 RNU1-30P-201ENST00000606575 163 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AC022079.2-201ENST00000619739 566 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 U6.98-201ENST00000637157 84 ntBASIC3.82□□□□□ -1.8
RPRD1AQ96P16 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPRD1AQ96P16 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPRD1AQ96P16 MFSD8-236ENST00000641509 4050 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 AL359837.1-201ENST00000381357 287 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 RNU6-1293P-201ENST00000384077 107 ntBASIC3.81□□□□□ -1.8
RPRD1AQ96P16 HMGB3P18-201ENST00000406327 590 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms