Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6-88P-201ENST00000606801 100 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC027807.2-201ENST00000616099 408 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL356321.1-201ENST00000621360 228 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AP002799.1-201ENST00000623552 423 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC005609.4-201ENST00000625071 447 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 OR5AK4P-201ENST00000635912 903 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC074101.1-201ENST00000637861 241 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AL031985.3-201ENST00000565390 2449 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 LINC00561-201ENST00000565815 2738 ntBASIC5.67□□□□□ -1.5
CHAMP1Q96JM3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 SCARNA15-201ENST00000607520 4325 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 Y_RNA.97-201ENST00000363094 102 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 RPL17P50-201ENST00000396131 546 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 RNU6-272P-201ENST00000411028 104 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC002524.1-201ENST00000411687 547 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 TBCAP2-201ENST00000416175 326 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 PSMD10P3-201ENST00000437000 448 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL121601.2-201ENST00000438019 707 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 PRPF38AP2-201ENST00000438179 851 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 VN1R34P-201ENST00000447387 883 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL358832.1-201ENST00000497800 389 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC105252.1-201ENST00000503089 286 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 OR4A45P-201ENST00000529954 901 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC024940.3-201ENST00000538551 316 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 SERPINE4P-201ENST00000554978 281 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL354760.1-201ENST00000608357 643 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC004067.1-201ENST00000608733 700 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AC072046.2-201ENST00000618366 268 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 AL353662.3-201ENST00000625131 237 ntBASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHAMP1Q96JM3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RNU6-462P-201ENST00000362659 105 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RNU6-251P-201ENST00000363235 104 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 HMGN1P14-201ENST00000412459 517 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 OFD1P18Y-201ENST00000420889 959 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 MTCO3P1-205ENST00000422088 832 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC073335.1-201ENST00000427776 363 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 BMS1P19-201ENST00000433925 393 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AL035551.1-201ENST00000446931 348 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RPL7P31-201ENST00000450192 724 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC108463.1-201ENST00000450258 347 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 TRGVB-201ENST00000453257 471 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AL359385.1-201ENST00000456509 365 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 KLF3P2-201ENST00000465138 268 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RPL21P71-201ENST00000465598 459 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC012123.2-201ENST00000485809 248 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC109462.1-201ENST00000491087 368 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 UBA52P3-201ENST00000491303 382 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RPL9P6-201ENST00000492764 598 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 RNU6-583P-201ENST00000516012 92 ntBASIC5.65□□□□□ -1.5
CHAMP1Q96JM3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms