Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 Y_RNA.529-201ENST00000384586 119 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 CYB5AP4-201ENST00000396692 399 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 DBIP1-201ENST00000401435 260 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AL162578.1-201ENST00000406202 378 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 RIMKLBP2-201ENST00000424737 654 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 RPL34P6-201ENST00000432390 345 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 HMGN1P2-201ENST00000445197 310 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC005008.1-201ENST00000456151 612 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 RPS29P15-201ENST00000458329 171 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC090602.1-201ENST00000469695 252 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC093278.1-201ENST00000494700 600 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 NIPA2P2-201ENST00000496376 1083 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC243972.3-201ENST00000539655 198 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 MIR4458-201ENST00000578872 75 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 SMIM12P1-201ENST00000603004 274 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC013553.2-201ENST00000604244 589 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC073046.2-201ENST00000604756 527 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 AC138965.3-201ENST00000623875 498 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 CYP4F35P-202ENST00000636121 390 ntBASIC6.43□□□□□ -1.38
CCDC97Q96F63 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC97Q96F63 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC97Q96F63 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 SNORA62.1-201ENST00000364287 154 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNU4-76P-201ENST00000364509 141 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNA5SP223-201ENST00000365174 120 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 MRPS6P2-201ENST00000381143 370 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 Y_RNA.509-201ENST00000384506 99 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNU6-754P-201ENST00000391166 107 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AL109755.1-201ENST00000401791 649 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNA5SP431-201ENST00000410312 120 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNU2-36P-201ENST00000410361 191 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC115283.1-201ENST00000427353 400 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 COX4I1P2-201ENST00000447446 547 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNU7-182P-201ENST00000459009 62 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 MRPS17P3-201ENST00000465453 385 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 HMGN1P16-201ENST00000508308 283 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC103783.1-201ENST00000520506 373 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 TRIM51DP-201ENST00000529746 596 ntBASIC6.42□□□□□ -1.38
CCDC97Q96F63 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC97Q96F63 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms