Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 ELOCP32-201ENST00000548625 324 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 PSMB7P1-201ENST00000556349 514 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC044913.1-201ENST00000557200 430 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC087465.1-201ENST00000560574 245 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC007224.1-201ENST00000564410 144 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC011477.5-201ENST00000586571 259 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC021749.1-201ENST00000604322 607 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC106791.2-201ENST00000604680 391 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC105129.3-201ENST00000605455 485 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 AL354976.1-201ENST00000613843 387 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AL445567.2-201ENST00000618935 498 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 SGO1P2-201ENST00000429458 1589 ntBASIC4.3□□□□□ -1.72
RTP4Q96DX8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RTP4Q96DX8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTP4Q96DX8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 SEC63P2-201ENST00000503863 1939 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL158163.1-201ENST00000603915 1649 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNU6-707P-201ENST00000364647 95 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNU6-98P-201ENST00000384173 107 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 SNORA70C-201ENST00000384538 135 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC093719.1-202ENST00000392735 373 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNA5SP36-201ENST00000410197 133 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNU6-757P-201ENST00000410334 100 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 RN7SKP263-201ENST00000411194 309 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 NRBF2P2-201ENST00000413087 861 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC01881-201ENST00000416103 412 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 OR5AW1P-201ENST00000426334 1006 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL035407.1-201ENST00000429211 571 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 DLGAP5P1-201ENST00000430307 464 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC096638.2-201ENST00000434965 711 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 ACTR3P2-201ENST00000439585 1257 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNA5SP246-201ENST00000458909 119 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 RPS29P19-201ENST00000479709 171 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC080014.1-201ENST00000496877 1201 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC104090.1-201ENST00000506341 1171 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 MTND4P2-201ENST00000507767 1203 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 RPS27AP18-201ENST00000515536 459 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 RNA5SP49-201ENST00000516450 115 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 CYCSP29-201ENST00000533731 318 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 MIR548Y-201ENST00000582739 110 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTP4Q96DX8 IPO5P1-202ENST00000600039 287 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC125494.3-201ENST00000602759 455 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL031281.1-201ENST00000604049 488 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC012603.1-201ENST00000606424 528 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
RTP4Q96DX8 AC023043.4-201ENST00000612081 449 ntBASIC4.29□□□□□ -1.72
RTP4Q96DX8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms