Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC090888.1-201ENST00000561335 1141 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 ISCA1P3-201ENST00000577104 373 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MIR4715-201ENST00000584117 79 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 RPL12P25-202ENST00000598100 674 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL008729.2-201ENST00000606393 473 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC090948.2-201ENST00000607363 564 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC005962.2-201ENST00000611427 652 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL136981.2-201ENST00000617319 734 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MIR7641-1-201ENST00000627518 61 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL390862.1-201ENST00000635467 1469 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RNU6-216P-201ENST00000363282 104 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RNU4-40P-201ENST00000364351 143 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 SNORA70F-201ENST00000384142 135 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RNU6-441P-201ENST00000384545 106 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RNU6-253P-201ENST00000384730 105 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RPL21P108-201ENST00000413857 481 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 NUP35P2-201ENST00000416748 943 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 TXNL1P1-201ENST00000429528 554 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 CBX1P1-201ENST00000440184 427 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 MTCYBP3-201ENST00000445588 1137 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC073587.1-201ENST00000447093 876 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 MTCO1P48-201ENST00000448024 1096 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 MTCO3P11-201ENST00000455103 774 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RPL5P30-201ENST00000465511 891 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC087879.1-201ENST00000474343 374 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC104763.1-201ENST00000475274 360 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RN7SL481P-201ENST00000477764 299 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC012158.1-204ENST00000483430 465 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 NCOR1P1-202ENST00000486162 291 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 SNX5P1-201ENST00000505757 1041 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 MTATP6P22-201ENST00000507369 598 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC093281.2-201ENST00000510153 597 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC018797.3-201ENST00000513388 1241 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 RNU6-232P-201ENST00000517144 64 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 IGLVIV-65-201ENST00000517313 360 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 IGKV1-32-201ENST00000519290 311 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC105129.1-201ENST00000560250 297 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AGGF1P8-201ENST00000562979 1000 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 SNORD39.3-201ENST00000584451 71 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC008759.1-201ENST00000589783 983 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 DUXAP11-201ENST00000603858 526 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 Z94722.1-201ENST00000604328 474 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC114878.2-201ENST00000604863 1251 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC009039.2-201ENST00000624524 529 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC092184.1-201ENST00000625042 715 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC135352.1-201ENST00000506173 1418 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AC108467.2-201ENST00000617640 1597 ntBASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.45□□□□□ -1.54
CHMP4CQ96CF2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 MTND4P26-201ENST00000415971 1359 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ZNF37BP-203ENST00000452306 1352 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RNU6-984P-201ENST00000363236 109 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 SNORA4.1-201ENST00000364263 144 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RNU6-1200P-201ENST00000384162 107 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 MIR195-201ENST00000385194 87 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 ZNF603P-201ENST00000405613 487 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AL512430.2-201ENST00000406786 339 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 MIR1284-201ENST00000408337 120 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 SNRPFP1-201ENST00000414761 252 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AC090960.1-201ENST00000421072 306 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RPS12P10-201ENST00000427031 377 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 RPL23AP1-201ENST00000428990 471 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 PTMAP3-201ENST00000447474 330 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 MTND2P19-201ENST00000449129 1012 ntBASIC5.44□□□□□ -1.54
CHMP4CQ96CF2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms