Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AL132838.2-201ENST00000492041 314 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC010424.1-201ENST00000506336 297 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 SNORA48.10-201ENST00000516965 160 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 SERPINE4P-201ENST00000554978 281 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AL390334.1-201ENST00000556395 450 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 TRAV15-201ENST00000556680 249 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AL121932.1-201ENST00000605542 214 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC092650.2-201ENST00000619984 902 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 AC099063.3-201ENST00000642066 185 ntBASIC5.65□□□□□ -1.5
SMC1BQ8NDV3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.65□□□□□ -1.51
SMC1BQ8NDV3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMC1BQ8NDV3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMC1BQ8NDV3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMC1BQ8NDV3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 MIR92A2-201ENST00000385299 75 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RNU6ATAC-201ENST00000408749 126 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 USP9YP33-201ENST00000412220 421 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 FCF1P2-201ENST00000415284 583 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 OR6C64P-201ENST00000419708 825 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 USP9YP28-201ENST00000435142 589 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 USP9YP35-201ENST00000435696 412 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RAB11AP1-201ENST00000442978 646 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC243772.1-201ENST00000451620 410 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 SNORA59A-201ENST00000459326 152 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RPL23AP2-201ENST00000471227 466 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC104689.1-201ENST00000473356 768 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 UBA52P3-201ENST00000491303 382 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RN7SL441P-201ENST00000492388 296 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RNU6-488P-201ENST00000515918 99 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 SLC2A13P1-201ENST00000531560 322 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AL049839.1-201ENST00000556151 657 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC073544.2-201ENST00000601155 540 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC008121.2-201ENST00000614647 523 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 AC090582.1-201ENST00000636321 199 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 OR2L1P-202ENST00000641567 1023 ntBASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.64□□□□□ -1.51
SMC1BQ8NDV3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC010329.2-201ENST00000595195 2737 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AL672167.1-206ENST00000356293 943 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RNU6-1122P-201ENST00000384449 107 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 ATP5F1P4-201ENST00000397288 746 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AL121978.1-201ENST00000402778 359 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RNU6-648P-201ENST00000410190 107 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 PIGPP2-201ENST00000411569 458 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RPL23AP39-201ENST00000415533 405 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC092634.6-201ENST00000418558 192 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 LINC00993-201ENST00000420453 540 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RPL23AP38-201ENST00000423801 469 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 COX6CP13-201ENST00000428703 226 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 DLGAP5P1-201ENST00000430307 464 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RPS3AP54-201ENST00000435535 734 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RPS3AP12-201ENST00000443616 753 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 RPL23AP15-201ENST00000450202 459 ntBASIC5.63□□□□□ -1.51
SMC1BQ8NDV3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms