Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF137P-201ENST00000456718 1920 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC026410.2-201ENST00000460281 156 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC087312.1-201ENST00000471411 480 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 RPS18P6-201ENST00000476880 458 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 PRELID3BP6-201ENST00000503839 571 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC114981.1-201ENST00000503897 678 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 ATP5LP3-201ENST00000514223 304 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 RNU6-27P-201ENST00000516146 107 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 RN7SKP147-201ENST00000517154 244 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC021451.1-201ENST00000523498 1129 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 PHBP17-201ENST00000528576 541 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 LINC00622-201ENST00000562811 1570 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 MIR4637-201ENST00000582405 84 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC069304.2-201ENST00000605154 435 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 CYCSP41-201ENST00000616920 296 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 MIR6861-201ENST00000618657 64 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AL360181.4-201ENST00000621752 134 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC026124.2-201ENST00000621847 656 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 MIR4727-201ENST00000622232 55 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC091905.4-201ENST00000623432 202 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 U6.101-201ENST00000637707 76 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AC139713.2-214ENST00000642059 1811 ntBASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01561Q8N1V8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 PRO1804-201ENST00000623780 2050 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MAPK10-373ENST00000641983 6772 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SNRPEP3-201ENST00000338402 276 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC067945.1-201ENST00000342609 618 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RNA5SP305-201ENST00000362665 119 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RN7SKP95-201ENST00000362860 303 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SNORA71.2-201ENST00000364941 134 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RNU6-925P-201ENST00000384629 104 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MIR513A2-201ENST00000385249 127 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RPL23AP26-201ENST00000412728 464 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AL049610.1-201ENST00000423374 372 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC016831.4-201ENST00000438302 307 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC092427.1-201ENST00000439177 601 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SNORA71B-202ENST00000439232 272 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC092647.3-201ENST00000443044 633 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC007327.1-201ENST00000447461 264 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 OR1H1P-201ENST00000448731 937 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 snoU13.4-201ENST00000458916 104 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RPS15AP17-201ENST00000470598 390 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC104763.1-201ENST00000475274 360 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC093267.1-201ENST00000489176 961 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AL592156.1-201ENST00000508758 304 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SNORA70.14-201ENST00000516205 110 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RN7SKP31-201ENST00000516354 278 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SLC2A13P1-201ENST00000531560 322 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC005832.3-201ENST00000537929 631 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AL110118.1-201ENST00000553543 400 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC007225.2-201ENST00000562529 256 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms