Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC020893.1-201ENST00000502452 580 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 MRPL49P2-201ENST00000521066 465 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AP000926.4-201ENST00000527351 454 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 HIGD1AP10-201ENST00000527837 282 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AC006077.1-201ENST00000604746 343 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AL392112.1-201ENST00000605115 829 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
NUDCD3Q8IVD9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NUDCD3Q8IVD9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
NUDCD3Q8IVD9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NUDCD3Q8IVD9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 PTMAP5-201ENST00000393073 333 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AL590704.1-201ENST00000402856 794 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 MTND4P22-201ENST00000413116 1169 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC009237.5-201ENST00000414271 501 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC007390.1-201ENST00000415722 356 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AL049610.1-201ENST00000423374 372 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC008065.1-201ENST00000428525 348 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC068135.1-201ENST00000446164 246 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 RPS3AP46-201ENST00000448352 682 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC133963.2-201ENST00000513686 578 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AP006245.1-201ENST00000522549 120 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC079880.2-201ENST00000603790 1213 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 MIR8058-201ENST00000615737 89 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 MIR6758-201ENST00000620653 63 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AP006248.3-201ENST00000623580 594 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 AC119744.1-201ENST00000454746 1715 ntBASIC3.58□□□□□ -1.84
NUDCD3Q8IVD9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 SNORA70E-201ENST00000384492 135 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 EI24P2-201ENST00000397776 1076 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 MTCO3P31-201ENST00000405526 789 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 HMGB3P31-201ENST00000413333 595 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AL158825.1-201ENST00000414735 521 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 LIPT1P1-201ENST00000415870 1186 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC068533.1-201ENST00000418542 415 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 C4BPAP2-201ENST00000428434 478 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC009220.1-201ENST00000451614 275 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC000367.1-201ENST00000452711 1766 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 UBDP1-202ENST00000457888 382 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 AC087312.1-201ENST00000471411 480 ntBASIC3.57□□□□□ -1.84
NUDCD3Q8IVD9 RPS4XP22-201ENST00000480755 780 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms