Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTND3P22-201ENST00000510932 243 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AP006245.2-201ENST00000522004 300 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AP002748.2-201ENST00000528671 348 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC021006.3-201ENST00000530771 192 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC051619.2-201ENST00000559063 397 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AP005119.2-201ENST00000579735 1105 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 DUXAP4-201ENST00000603046 613 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC008536.2-201ENST00000607284 349 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC010424.2-201ENST00000607594 443 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AP001521.2-201ENST00000608772 546 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL592295.2-201ENST00000612578 206 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL122125.1-201ENST00000616999 600 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL353662.3-201ENST00000625131 237 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VRK3Q8IV63 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
VRK3Q8IV63 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.78□□□□□ -1.64
VRK3Q8IV63 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.65
VRK3Q8IV63 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
VRK3Q8IV63 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 RNU5F-6P-201ENST00000362979 116 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RNU6-839P-201ENST00000363347 108 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RNU5F-7P-201ENST00000363696 115 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 SNORA58B-201ENST00000364259 136 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 RNU6-98P-201ENST00000384173 107 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RNU6-876P-201ENST00000391295 104 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC007742.1-201ENST00000425789 329 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 ELOCP26-201ENST00000436067 329 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC010733.1-201ENST00000451515 401 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 HMGN1P10-201ENST00000474557 553 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RBM43P1-201ENST00000476891 1081 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RN7SL826P-201ENST00000479724 288 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC013828.1-201ENST00000481845 158 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC108078.3-201ENST00000502633 489 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC019235.1-201ENST00000503847 207 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC108078.1-201ENST00000508073 725 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 ENPP7P9-201ENST00000514456 627 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 PAICSP4-201ENST00000517543 1253 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC007342.5-201ENST00000571340 2142 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 MIR4646-201ENST00000580775 63 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 KPNA2P3-201ENST00000584190 848 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC008752.3-201ENST00000588113 712 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL596327.1-201ENST00000603629 213 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL161729.4-201ENST00000604650 476 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC131902.3-201ENST00000611767 581 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 AL353726.1-201ENST00000614041 1000 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 AC112204.3-201ENST00000623822 332 ntBASIC4.77□□□□□ -1.65
VRK3Q8IV63 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VRK3Q8IV63 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.77□□□□□ -1.65
VRK3Q8IV63 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VRK3Q8IV63 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK3Q8IV63 OR4K15-201ENST00000305051 1216 ntBASIC4.76□□□□□ -1.65
VRK3Q8IV63 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms