Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 USP9YP35-201ENST00000435696 412 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC011753.3-201ENST00000443436 406 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 MTND1P29-201ENST00000448112 647 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC108463.1-201ENST00000450258 347 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 OR6C5P-201ENST00000452388 923 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC016724.1-201ENST00000453215 421 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 MTCO3P16-201ENST00000454456 754 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 SETP11-201ENST00000473027 690 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 RN7SL727P-201ENST00000482164 296 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC092045.1-201ENST00000495716 1231 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 KLRA1P-201ENST00000503499 986 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 MTCYBP17-201ENST00000503579 789 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC018797.3-201ENST00000513388 1241 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 OR7K1P-201ENST00000546439 926 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC084824.1-201ENST00000550917 1005 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 HMGN2P6-201ENST00000551091 273 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC007954.1-201ENST00000554198 494 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 SULT1C2P1-202ENST00000562418 459 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 BGLT3-201ENST00000564523 994 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AL121834.1-201ENST00000572284 509 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC008759.1-201ENST00000589783 983 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 WISP1-OT1-201ENST00000602893 642 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AL031667.3-201ENST00000620124 655 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 PCMTD1P7-201ENST00000634506 357 ntBASIC4.09□□□□□ -1.75
SHFQ7M4L6 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SHFQ7M4L6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHFQ7M4L6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
SHFQ7M4L6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SHFQ7M4L6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHFQ7M4L6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 RNA5SP507-201ENST00000363603 121 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 RNU6-1122P-201ENST00000384449 107 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 RNU1-44P-201ENST00000384453 163 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 RNU6-441P-201ENST00000384545 106 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 RNU6-178P-201ENST00000384631 104 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 RPL12P34-201ENST00000424532 479 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 CENPIP1-201ENST00000425713 902 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AL035407.1-201ENST00000429211 571 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 RPL23AP35-201ENST00000451906 501 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 TRGVB-201ENST00000453257 471 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 ISCUP1-201ENST00000454451 448 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 MTCO3P11-201ENST00000455103 774 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 TPTE2P5-203ENST00000458118 728 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 PPIAP21-201ENST00000464473 501 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 RPL7P1-201ENST00000468161 747 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 RPL7P9-201ENST00000468715 747 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC080014.1-201ENST00000496877 1201 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC008953.1-201ENST00000497334 318 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 OR2A20P-203ENST00000498397 1268 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC108078.3-201ENST00000502633 489 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC135352.1-201ENST00000506173 1418 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC117529.2-201ENST00000512159 2068 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 BTF3P13-201ENST00000513224 490 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC008694.2-201ENST00000517591 306 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC090151.1-201ENST00000520784 730 ntBASIC4.08□□□□□ -1.76
SHFQ7M4L6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.08□□□□□ -1.76
SHFQ7M4L6 OR5BR1P-201ENST00000524992 1330 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms