Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC093151.1-201ENST00000427711 313 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC119618.1-201ENST00000434191 222 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC099670.2-201ENST00000435130 321 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 RPS27AP15-201ENST00000447672 466 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 PPIAP20-201ENST00000449839 135 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 TRBVA-201ENST00000498804 316 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC103843.2-201ENST00000530523 682 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 SS18L2P2-201ENST00000583960 235 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC100812.1-201ENST00000607622 580 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC006157.1-201ENST00000611750 366 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC007546.1-201ENST00000619452 559 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC067931.1-201ENST00000624190 671 ntBASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXR1Q6PIV2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 AP001284.1-201ENST00000528393 2118 ntBASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.34□□□□□ -1.4
FOXR1Q6PIV2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC023245.2-201ENST00000530760 2978 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RNU6-1252P-201ENST00000363054 104 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RNU6-1040P-201ENST00000383974 107 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.645-201ENST00000391229 102 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.646-201ENST00000410980 101 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC073109.1-201ENST00000445066 978 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AL161722.1-201ENST00000446972 1032 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RPL7P52-201ENST00000449200 742 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 HMGB1P7-201ENST00000450921 612 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RN7SL254P-201ENST00000460609 284 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 GM2AP2-201ENST00000491764 562 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AK3P4-201ENST00000504283 583 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RNU6-1038P-201ENST00000516516 104 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.721-201ENST00000517207 102 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AP000827.1-201ENST00000527814 258 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AL118558.2-201ENST00000556294 238 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 BNIP3P16-201ENST00000589779 534 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RPSAP75-201ENST00000605848 301 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms