Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC004448.2-201ENST00000422360 586 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 HLA-N-201ENST00000437516 135 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC026782.2-201ENST00000510845 636 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 IGLV3-26-201ENST00000520756 302 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 LSM3P2-201ENST00000551246 273 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SNORD91B-202ENST00000608459 222 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 MIR7154-201ENST00000620673 73 ntBASIC3.03□□□□□ -1.92
RIF1Q5UIP0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.03□□□□□ -1.92
RIF1Q5UIP0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.03□□□□□ -1.93
RIF1Q5UIP0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AL353692.2-201ENST00000407054 335 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 RNA5SP508-201ENST00000411327 119 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 WASF1P1-201ENST00000447560 1131 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC117440.1-201ENST00000474107 571 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 KLHL2P1-201ENST00000508691 521 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 RN7SKP116-201ENST00000516902 319 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC079089.3-201ENST00000603094 673 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 RPL23AP67-201ENST00000465341 474 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC084357.1-201ENST00000473404 255 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC018797.3-201ENST00000513388 1241 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 AL356274.1-201ENST00000617064 410 ntBASIC3.02□□□□□ -1.93
RIF1Q5UIP0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
RIF1Q5UIP0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 MIR1287-201ENST00000408492 90 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AP000936.2-201ENST00000447151 681 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AC006518.1-201ENST00000541449 943 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 MIR196B-201ENST00000384852 84 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 OR51A3P-201ENST00000413596 924 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 HMGN2P27-201ENST00000427352 270 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 MAPRE1P3-201ENST00000435438 796 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AC021146.3-201ENST00000511911 260 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AC026634.1-201ENST00000634369 198 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RIF1Q5UIP0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.01□□□□□ -1.93
RIF1Q5UIP0 U3.23-201ENST00000391132 200 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 CYCSP45-201ENST00000402289 315 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 MIR1289-2-201ENST00000408360 111 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3□□□□□ -1.93
RIF1Q5UIP0 AL031736.2-201ENST00000426573 787 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 DEFB109A-201ENST00000482450 265 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AC034159.1-201ENST00000513885 583 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AP006245.1-201ENST00000522549 120 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3□□□□□ -1.93
RIF1Q5UIP0 AL049874.4-201ENST00000557593 255 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RIF1Q5UIP0 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3□□□□□ -1.93
RIF1Q5UIP0 RPS4XP2-201ENST00000458402 793 ntBASIC3□□□□□ -1.93
RIF1Q5UIP0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms