Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 PTGES3P3-201ENST00000511479 482 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 RN7SKP141-201ENST00000516167 338 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AF279873.1-201ENST00000523393 313 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 CR383656.6-201ENST00000550518 394 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 LRRC77P-213ENST00000637727 880 ntBASIC3.06□□□□□ -1.92
CCDC58Q4VC31 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC58Q4VC31 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 SPRR2C-201ENST00000290702 219 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AL356968.1-201ENST00000416622 474 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 HSPE1P1-201ENST00000421494 318 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AC006994.1-201ENST00000438212 839 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 VN1R17P-201ENST00000472048 1090 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AC093278.1-201ENST00000494700 600 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AC108078.3-201ENST00000502633 489 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 OR5H3P-201ENST00000502817 919 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AL713998.2-201ENST00000604538 1198 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 AL445423.1-201ENST00000609941 536 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
CCDC58Q4VC31 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC58Q4VC31 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC011978.2-201ENST00000569835 2054 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC004925.1-201ENST00000624256 2706 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 FRG1CP-201ENST00000358464 769 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 RNU6-600P-201ENST00000362524 99 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 RNU1-13P-201ENST00000384499 162 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 RSL24D1P1-201ENST00000404972 493 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 OR4C10P-201ENST00000434991 931 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 COX6CP2-201ENST00000444980 225 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 CALM1P2-201ENST00000452941 448 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 NCOR1P1-202ENST00000486162 291 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC026402.1-201ENST00000513642 170 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 RN7SKP244-201ENST00000516513 307 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 CDH12P4-201ENST00000517835 295 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 CDH12P3-201ENST00000517935 295 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 CDH12P1-201ENST00000518435 295 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 MIR3690-201ENST00000580266 75 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC015849.6-201ENST00000605454 474 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC019131.2-201ENST00000609071 870 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC231759.1-201ENST00000616455 597 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC010435.1-201ENST00000623353 1177 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.04□□□□□ -1.92
CCDC58Q4VC31 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC58Q4VC31 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 RNU6-356P-201ENST00000384140 107 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC004987.3-201ENST00000413879 771 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 RPL21P112-201ENST00000434403 463 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 HMGN2P13-201ENST00000476476 274 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC093853.1-201ENST00000515689 483 ntBASIC3.03□□□□□ -1.92
CCDC58Q4VC31 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC58Q4VC31 OR4U1P-201ENST00000554958 912 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms