Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC026784.1-201ENST00000507986 352 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 snoU109.6-201ENST00000516831 118 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AC083923.1-201ENST00000523708 376 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AP001372.4-201ENST00000524889 472 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX1Q15475 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC023161.2-201ENST00000551218 780 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 POLR2KP1-201ENST00000553226 168 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX1Q15475 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX1Q15475 AC125494.3-201ENST00000602759 455 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AC023813.4-201ENST00000607580 580 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX1Q15475 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AC024595.1-201ENST00000623088 387 ntBASIC3.82□□□□□ -1.8
SIX1Q15475 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX1Q15475 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX1Q15475 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 SPRR2C-201ENST00000290702 219 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 RNU1-64P-201ENST00000365443 163 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 RNU6-178P-201ENST00000384631 104 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 MIR708-201ENST00000390708 88 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AL603865.2-201ENST00000401679 213 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 MTCO2P23-201ENST00000425216 680 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX1Q15475 MTCYBP32-201ENST00000427945 1084 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC114973.1-201ENST00000429057 632 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 KCTD10P1-201ENST00000434203 625 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 OR4C10P-201ENST00000434991 931 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX1Q15475 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC068135.1-201ENST00000446164 246 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC239809.1-201ENST00000450470 217 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC020898.1-201ENST00000474167 787 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC108729.1-201ENST00000487812 947 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 AC096571.1-202ENST00000506634 735 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC010460.2-201ENST00000509054 677 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.81□□□□□ -1.8
SIX1Q15475 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.81□□□□□ -1.8
SIX1Q15475 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 AL049838.1-201ENST00000563647 981 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AC095057.3-201ENST00000567102 1157 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 RPAP2P1-201ENST00000603626 1168 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 CYCSP41-201ENST00000616920 296 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 BMS1P21-201ENST00000634565 365 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 AL590396.4-201ENST00000636779 956 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX1Q15475 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX1Q15475 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX1Q15475 AL356489.2-201ENST00000566968 3528 ntBASIC3.81□□□□□ -1.8
SIX1Q15475 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 AC007656.2-201ENST00000624902 4547 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 AC092079.1-201ENST00000558620 1985 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX1Q15475 RPL7P60-201ENST00000397636 735 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 ZNF602P-201ENST00000405929 924 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AC092638.1-201ENST00000411966 1275 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 USP9YP21-201ENST00000420603 432 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 OSTCP5-201ENST00000425293 453 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.8□□□□□ -1.8
SIX1Q15475 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 AC092170.1-201ENST00000440211 356 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AL050341.1-201ENST00000447743 313 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AL162151.2-201ENST00000448875 158 ntBASIC3.8□□□□□ -1.8
SIX1Q15475 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX1Q15475 RPL23AP12-201ENST00000467573 473 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms