Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.21□□□□□ -1.74
LTBQ06643 AC067959.1-201ENST00000604334 379 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AL592221.1-201ENST00000605266 382 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC069545.1-201ENST00000605671 358 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AL391497.1-201ENST00000608671 547 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC008443.7-201ENST00000622195 246 ntBASIC4.21□□□□□ -1.74
LTBQ06643 AC005086.4-201ENST00000623065 213 ntBASIC4.21□□□□□ -1.74
LTBQ06643 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LTBQ06643 MTCO1P6-201ENST00000481192 1384 ntBASIC4.21□□□□□ -1.74
LTBQ06643 MTND4P34-201ENST00000572715 1371 ntBASIC4.21□□□□□ -1.74
LTBQ06643 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
LTBQ06643 AL136164.3-201ENST00000624429 3978 ntBASIC4.21□□□□□ -1.74
LTBQ06643 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LTBQ06643 DHX40P1-201ENST00000588725 1412 ntBASIC4.21□□□□□ -1.74
LTBQ06643 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LTBQ06643 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 AC005539.1-201ENST00000443768 1479 ntBASIC4.2□□□□□ -1.74
LTBQ06643 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 AL672167.1-206ENST00000356293 943 ntBASIC4.2□□□□□ -1.74
LTBQ06643 RNU4-21P-201ENST00000362802 126 ntBASIC4.2□□□□□ -1.74
LTBQ06643 RNU6-1339P-201ENST00000363574 91 ntBASIC4.2□□□□□ -1.74
LTBQ06643 Y_RNA.517-201ENST00000384551 106 ntBASIC4.2□□□□□ -1.74
LTBQ06643 MIR195-201ENST00000385194 87 ntBASIC4.2□□□□□ -1.74
LTBQ06643 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LTBQ06643 TAF9BP1-201ENST00000396646 746 ntBASIC4.2□□□□□ -1.74
LTBQ06643 RNU6-77P-201ENST00000410554 91 ntBASIC4.2□□□□□ -1.74
LTBQ06643 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 AL161449.1-201ENST00000414531 1199 ntBASIC4.2□□□□□ -1.74
LTBQ06643 ELOCP17-201ENST00000414751 326 ntBASIC4.2□□□□□ -1.74
LTBQ06643 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AP001324.1-201ENST00000428553 399 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 RPS27AP12-201ENST00000429552 465 ntBASIC4.2□□□□□ -1.74
LTBQ06643 MTCO1P54-201ENST00000430139 712 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 AC005154.2-201ENST00000438110 379 ntBASIC4.2□□□□□ -1.74
LTBQ06643 CACYBPP1-201ENST00000438592 684 ntBASIC4.2□□□□□ -1.74
LTBQ06643 USP9YP22-201ENST00000438971 294 ntBASIC4.2□□□□□ -1.74
LTBQ06643 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 RFC5P1-201ENST00000454419 874 ntBASIC4.2□□□□□ -1.74
LTBQ06643 RPL7P48-201ENST00000461513 746 ntBASIC4.2□□□□□ -1.74
LTBQ06643 RPL12P20-201ENST00000475538 479 ntBASIC4.2□□□□□ -1.74
LTBQ06643 GAPDHP39-201ENST00000481866 979 ntBASIC4.2□□□□□ -1.74
LTBQ06643 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 AC004069.2-201ENST00000505438 1114 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC079140.3-201ENST00000511111 550 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC109445.1-201ENST00000512356 383 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.2□□□□□ -1.74
LTBQ06643 HMGB1P19-201ENST00000517578 577 ntBASIC4.2□□□□□ -1.74
LTBQ06643 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 IGJP1-201ENST00000522682 475 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 AP002812.4-201ENST00000532139 286 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
LTBQ06643 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.2□□□□□ -1.74
LTBQ06643 MIR4801-201ENST00000582704 82 ntBASIC4.2□□□□□ -1.74
LTBQ06643 MIR548Y-201ENST00000582739 110 ntBASIC4.2□□□□□ -1.74
LTBQ06643 U73023.1-201ENST00000603134 700 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC073091.2-201ENST00000603205 907 ntBASIC4.2□□□□□ -1.74
LTBQ06643 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC116165.2-201ENST00000616705 206 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AC009509.4-201ENST00000619202 509 ntBASIC4.2□□□□□ -1.74
LTBQ06643 AL031667.3-201ENST00000620124 655 ntBASIC4.2□□□□□ -1.74
LTBQ06643 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 AC140113.4-201ENST00000622087 222 ntBASIC4.2□□□□□ -1.74
LTBQ06643 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 PCMTD1P7-201ENST00000634506 357 ntBASIC4.2□□□□□ -1.74
LTBQ06643 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LTBQ06643 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LTBQ06643 AC011477.1-204ENST00000623416 1325 ntBASIC4.2□□□□□ -1.74
LTBQ06643 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms