Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 CENPBD1P1-201ENST00000464061 469 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC008837.1-201ENST00000511513 412 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC009163.5-201ENST00000575421 637 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC244517.3-201ENST00000616254 1235 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.92□□□□□ -2.1
HSPG2P98160 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC1.92□□□□□ -2.1
HSPG2P98160 AADACP1-206ENST00000561502 1193 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 AC007318.2-201ENST00000620999 243 ntBASIC1.92□□□□□ -2.1
HSPG2P98160 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.92□□□□□ -2.1
HSPG2P98160 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HSPG2P98160 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HSPG2P98160 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
HSPG2P98160 MIR22-201ENST00000362190 85 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 MIR513A2-201ENST00000385249 127 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC012065.2-201ENST00000421295 375 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC074367.1-201ENST00000438685 1125 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RNF148-202ENST00000447240 839 ntTSL 2 BASIC1.91□□□□□ -2.1
HSPG2P98160 AC017037.1-201ENST00000508460 471 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RN7SKP116-201ENST00000516902 319 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AL049874.4-201ENST00000557593 255 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.91□□□□□ -2.1
HSPG2P98160 uc_338.1-201ENST00000612113 180 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.91□□□□□ -2.1
HSPG2P98160 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HSPG2P98160 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 Y_RNA.4-201ENST00000362333 112 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 HIGD1AP13-201ENST00000509878 289 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RNA5SP24-201ENST00000516478 95 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.91□□□□□ -2.1
HSPG2P98160 AP003122.3-201ENST00000526316 255 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.91□□□□□ -2.1
HSPG2P98160 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 AC022031.1-201ENST00000585985 2593 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.91□□□□□ -2.1
HSPG2P98160 THAP12P8-201ENST00000447914 2115 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 FAM35DP-201ENST00000323387 2712 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 MIR184-201ENST00000384962 84 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RNA5SP184-201ENST00000411071 108 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.91□□□□□ -2.1
HSPG2P98160 NPM1P39-201ENST00000449818 867 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.91□□□□□ -2.1
HSPG2P98160 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HSPG2P98160 AC006518.1-201ENST00000541449 943 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 AL583832.1-201ENST00000603227 784 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC007566.2-201ENST00000603642 413 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HSPG2P98160 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 RPS3AP26-201ENST00000398259 784 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RPL30P2-201ENST00000414021 291 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.91□□□□□ -2.1
HSPG2P98160 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC1.91□□□□□ -2.1
HSPG2P98160 SNRPGP5-201ENST00000456003 220 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC010468.1-201ENST00000461022 817 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 RN7SL499P-201ENST00000481141 276 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.91□□□□□ -2.1
HSPG2P98160 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.91□□□□□ -2.1
HSPG2P98160 ATP5F1P7-201ENST00000567330 760 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 EIF1P6-201ENST00000600054 334 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 AC096947.1-201ENST00000603233 470 ntBASIC1.91□□□□□ -2.1
HSPG2P98160 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HSPG2P98160 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HSPG2P98160 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HSPG2P98160 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HSPG2P98160 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
HSPG2P98160 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HSPG2P98160 RAP1BP1-201ENST00000412709 553 ntBASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms