Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.465-201ENST00000384293 102 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 SNORA37-201ENST00000384504 129 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 RNU6-837P-201ENST00000391056 108 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 TAF9BP1-201ENST00000396646 746 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL022722.2-201ENST00000402519 180 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 RN7SKP235-201ENST00000410662 305 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL161449.1-201ENST00000414531 1199 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDL3P58872 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 RPS26P2-201ENST00000440331 348 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDL3P58872 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 DDX39BP2-208ENST00000453923 258 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 RPS7P7-201ENST00000463499 571 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC022034.3-201ENST00000471393 478 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 RN7SL812P-201ENST00000493791 279 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 Vault.1-201ENST00000516474 102 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AC023813.2-201ENST00000564321 469 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL132657.2-201ENST00000564417 358 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC090616.5-202ENST00000582111 297 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 VN1R85P-201ENST00000601587 426 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC004987.4-201ENST00000603383 338 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC008966.2-201ENST00000606157 453 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AP001521.1-201ENST00000609150 300 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC078899.5-201ENST00000612475 178 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL354976.1-201ENST00000613843 387 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AC090116.1-201ENST00000615679 446 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AC009318.4-201ENST00000620496 486 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDL3P58872 AC092184.1-201ENST00000625042 715 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.18□□□□□ -1.58
RHBDL3P58872 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RHBDL3P58872 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RNU1-94P-201ENST00000362627 173 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 RNU1-14P-201ENST00000362759 152 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 RNA5SP307-201ENST00000362863 116 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDL3P58872 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RPL36AP10-201ENST00000421785 322 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RPL23AP38-201ENST00000423801 469 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC012519.1-201ENST00000424588 610 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RPL23AP76-201ENST00000441860 458 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RPS27AP13-201ENST00000498403 237 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 OR5H5P-201ENST00000503164 928 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC093824.1-201ENST00000508796 343 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RNA5SP519-201ENST00000516480 119 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDL3P58872 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 RPL23AP97-201ENST00000568955 471 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 AL020997.2-201ENST00000602607 184 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 RNF138P2-201ENST00000603490 592 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC009220.3-201ENST00000604318 586 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AC024941.1-201ENST00000612250 334 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 FAM27D1-201ENST00000612308 341 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 SNX18P1Y-201ENST00000616231 511 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDL3P58872 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 AF001550.2-201ENST00000636643 217 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 FP325313.1-201ENST00000638228 703 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 AL672167.1-203ENST00000641299 2975 ntBASIC5.17□□□□□ -1.58
RHBDL3P58872 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RHBDL3P58872 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
RHBDL3P58872 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDL3P58872 MTCO1P14-201ENST00000441695 1559 ntBASIC5.16□□□□□ -1.58
RHBDL3P58872 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDL3P58872 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RHBDL3P58872 RNU6-339P-201ENST00000384310 107 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms