Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTND5P31-201ENST00000419366 1374 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN20P56880 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 FAM3C2-201ENST00000312214 681 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 OR5H2-201ENST00000355273 945 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLDN20P56880 RNU6-251P-201ENST00000363235 104 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 RNA5SP22-201ENST00000365393 109 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 RNU6-1293P-201ENST00000384077 107 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 MIR141-201ENST00000384975 95 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN20P56880 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC016397.1-201ENST00000412463 242 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 MFSD13B-201ENST00000420133 1290 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 RAD23BP1-201ENST00000421404 1227 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC133473.1-201ENST00000455173 299 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 APOOP2-201ENST00000461561 539 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 MTND1P16-201ENST00000465177 898 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 KLRA1P-201ENST00000503499 986 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN20P56880 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC139783.2-201ENST00000504847 1145 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 NPM1P6-201ENST00000521088 871 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN20P56880 TRAV15-201ENST00000556680 249 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC074051.3-201ENST00000570238 358 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC090312.1-201ENST00000580637 348 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC005191.1-201ENST00000603950 358 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AC012409.3-201ENST00000611343 981 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 AL359535.1-201ENST00000612100 1087 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 MIR6864-201ENST00000617935 70 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 RNU6-156P-201ENST00000621869 107 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN20P56880 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 AC011266.1-201ENST00000624119 3569 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 CPHL1P-201ENST00000461341 3407 ntBASIC4.06□□□□□ -1.76
CLDN20P56880 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CLDN20P56880 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN20P56880 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN20P56880 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN20P56880 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN20P56880 CDR1-202ENST00000625883 1485 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 CYP1D1P-201ENST00000416662 1433 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CLDN20P56880 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
CLDN20P56880 AC012020.1-201ENST00000624541 1728 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN20P56880 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLDN20P56880 SNORD116-8-201ENST00000384365 95 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN20P56880 AC004022.2-201ENST00000413824 193 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 SNRPFP1-201ENST00000414761 252 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 MTND2P18-201ENST00000419962 1030 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AL732292.1-201ENST00000426692 226 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 RPL21P91-201ENST00000429231 479 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AC005345.1-201ENST00000431868 217 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN20P56880 RPS20P1-201ENST00000434853 354 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 SETP8-201ENST00000435341 628 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN20P56880 AC105402.2-201ENST00000438503 358 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 MTCYBP34-201ENST00000439552 670 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 RPS26P56-201ENST00000444468 240 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN20P56880 RPL23AP43-201ENST00000446445 471 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 Z83846.1-201ENST00000446798 265 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN20P56880 RPL12P26-201ENST00000452430 487 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AL109741.2-201ENST00000455561 343 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN20P56880 AP000893.1-201ENST00000474462 794 ntBASIC4.05□□□□□ -1.76
CLDN20P56880 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN20P56880 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN20P56880 SETP14-201ENST00000497538 873 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms