Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC017099.1-201ENST00000448261 1028 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX1P55347 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX1P55347 AL049830.2-201ENST00000480072 201 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AC073522.1-201ENST00000483312 377 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 FCF1P3-201ENST00000496394 590 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX1P55347 MTND3P24-201ENST00000506306 329 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX1P55347 RNU6-352P-201ENST00000516908 107 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 C1DP5-201ENST00000525775 383 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.57□□□□□ -1.84
PKNOX1P55347 PTP4A1P6-201ENST00000531034 478 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PKNOX1P55347 OSBPL9P3-201ENST00000534523 595 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX1P55347 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AC125494.3-201ENST00000602759 455 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 LLPHP1-201ENST00000603571 367 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX1P55347 AC005344.1-201ENST00000613391 459 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AL162574.2-201ENST00000614618 657 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 MIR6864-201ENST00000617935 70 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 FP236240.3-201ENST00000623061 327 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AC024595.1-201ENST00000623088 387 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AC020923.1-201ENST00000624021 917 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.57□□□□□ -1.84
PKNOX1P55347 MFSD8-213ENST00000641134 1327 ntBASIC3.57□□□□□ -1.84
PKNOX1P55347 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PKNOX1P55347 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 RIOK3P1-201ENST00000418778 1528 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 RNA5SP27-201ENST00000363839 119 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 RNA5SP42-201ENST00000364278 115 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 SNORA56-201ENST00000383966 129 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC004987.3-201ENST00000413879 771 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC073310.1-201ENST00000423226 1033 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AL591419.1-201ENST00000427423 339 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 MRPS18BP2-201ENST00000434310 759 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC074367.1-201ENST00000438685 1125 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX1P55347 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX1P55347 PPIAP3-201ENST00000450588 505 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.56□□□□□ -1.84
PKNOX1P55347 MRPL35P4-201ENST00000453682 566 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX1P55347 CFTRP1-201ENST00000456646 183 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 RPL37P6-202ENST00000464216 403 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.56□□□□□ -1.84
PKNOX1P55347 SNX5P1-201ENST00000505757 1041 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC010460.1-201ENST00000507087 466 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 ARL2BPP6-201ENST00000512757 439 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 AC008011.1-201ENST00000545989 227 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC074029.1-201ENST00000552531 1044 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.56□□□□□ -1.84
PKNOX1P55347 AC027104.1-201ENST00000563702 681 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AC079148.1-201ENST00000565944 819 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 RMST_10.1-201ENST00000616309 154 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 AL732618.1-201ENST00000623251 301 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 AL356094.1-201ENST00000624663 1212 ntBASIC3.56□□□□□ -1.84
PKNOX1P55347 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PKNOX1P55347 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
PKNOX1P55347 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.56□□□□□ -1.84
PKNOX1P55347 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 AP004289.2-201ENST00000444413 1457 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.55□□□□□ -1.84
PKNOX1P55347 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC008432.1-201ENST00000615912 1320 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 MIR372-201ENST00000362225 67 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 SNORD56.4-201ENST00000363883 71 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 RNU6-1293P-201ENST00000384077 107 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AC092745.2-202ENST00000411880 369 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 AL445183.3-201ENST00000414168 502 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.55□□□□□ -1.84
PKNOX1P55347 AL121882.1-201ENST00000422893 417 ntBASIC3.55□□□□□ -1.84
PKNOX1P55347 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PKNOX1P55347 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms