Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CAB39P1-201ENST00000502277 460 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 PRELID3BP6-201ENST00000503839 571 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 NDUFB4P9-201ENST00000511646 388 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 KCTD9P2-201ENST00000512203 1013 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 SNORA19.3-201ENST00000516165 130 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 IGLVIV-53-201ENST00000520107 367 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AF279873.1-201ENST00000523393 313 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 NDUFS5P6-201ENST00000529136 295 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.27□□□□□ -1.73
LIMK1P53667 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.27□□□□□ -1.73
LIMK1P53667 CCNG2P1-201ENST00000549521 1000 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC122134.1-202ENST00000569111 1201 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AL606834.3-201ENST00000602615 496 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 RPAP2P1-201ENST00000603626 1168 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AC012468.1-201ENST00000604888 430 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 AC019176.2-201ENST00000611579 315 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 AL359535.1-201ENST00000612100 1087 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIMK1P53667 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.27□□□□□ -1.73
LIMK1P53667 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LIMK1P53667 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LIMK1P53667 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.27□□□□□ -1.73
LIMK1P53667 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LIMK1P53667 AC111188.2-201ENST00000529697 1387 ntBASIC4.27□□□□□ -1.73
LIMK1P53667 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC066616.2-201ENST00000559334 1481 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 RNU6-236P-201ENST00000363886 106 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 MIR122-201ENST00000385044 85 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LIMK1P53667 EIF5P1-201ENST00000400019 1231 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 GSTA8P-201ENST00000404253 637 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC093578.1-201ENST00000415219 368 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 COX6B1P7-201ENST00000430845 235 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 CKS1BP5-201ENST00000434172 273 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 BX276092.4-201ENST00000452056 248 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.26□□□□□ -1.73
LIMK1P53667 RPS6P4-201ENST00000494693 758 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC068305.1-201ENST00000497406 726 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC005921.1-201ENST00000510589 286 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 snoZ278.1-201ENST00000517059 112 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 TRMT10BP1-201ENST00000519377 943 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC090330.1-201ENST00000588646 764 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.26□□□□□ -1.73
LIMK1P53667 AL022067.1-201ENST00000602426 454 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 BPIFA4P-203ENST00000603168 689 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC096947.1-201ENST00000603233 470 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 SRGNP1-201ENST00000603392 451 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC022960.3-201ENST00000619794 441 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC084824.4-201ENST00000620106 731 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 AC011266.1-201ENST00000624119 3569 ntBASIC4.26□□□□□ -1.73
LIMK1P53667 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.26□□□□□ -1.73
LIMK1P53667 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.26□□□□□ -1.73
LIMK1P53667 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LIMK1P53667 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 AC090337.1-201ENST00000579651 2074 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIMK1P53667 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LIMK1P53667 RNA5SP189-201ENST00000364920 115 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 OR1L1-202ENST00000373686 1083 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 MIR491-201ENST00000384877 84 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 RNU2-21P-201ENST00000410368 188 ntBASIC4.25□□□□□ -1.73
LIMK1P53667 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.25□□□□□ -1.73
LIMK1P53667 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms