Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.81□□□□□ -1.8
NUP98P52948 AC013410.1-201ENST00000436223 1232 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AC093156.1-201ENST00000440382 670 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP98P52948 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP98P52948 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
NUP98P52948 OR5H3P-201ENST00000502817 919 ntBASIC3.81□□□□□ -1.8
NUP98P52948 RNA5SP356-201ENST00000515972 94 ntBASIC3.81□□□□□ -1.8
NUP98P52948 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.81□□□□□ -1.8
NUP98P52948 AP001636.2-201ENST00000525517 696 ntBASIC3.81□□□□□ -1.8
NUP98P52948 AL139174.1-201ENST00000531489 886 ntBASIC3.81□□□□□ -1.8
NUP98P52948 Z82195.1-201ENST00000604558 398 ntBASIC3.81□□□□□ -1.8
NUP98P52948 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUP98P52948 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
NUP98P52948 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NUP98P52948 H3F3AP1-201ENST00000559984 334 ntBASIC3.8□□□□□ -1.8
NUP98P52948 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.8□□□□□ -1.8
NUP98P52948 AC024153.1-201ENST00000603103 365 ntBASIC3.8□□□□□ -1.8
NUP98P52948 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP98P52948 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.8□□□□□ -1.8
NUP98P52948 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NUP98P52948 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP98P52948 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.8□□□□□ -1.8
NUP98P52948 AC005332.5-201ENST00000591222 2919 ntBASIC3.79□□□□□ -1.8
NUP98P52948 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUP98P52948 U3.42-201ENST00000408746 214 ntBASIC3.79□□□□□ -1.8
NUP98P52948 OR6C64P-201ENST00000419708 825 ntBASIC3.79□□□□□ -1.8
NUP98P52948 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP98P52948 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 AC108734.1-201ENST00000439549 399 ntBASIC3.79□□□□□ -1.8
NUP98P52948 AC112653.1-201ENST00000443851 386 ntBASIC3.79□□□□□ -1.8
NUP98P52948 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP98P52948 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.79□□□□□ -1.8
NUP98P52948 AC141257.3-201ENST00000572906 215 ntBASIC3.79□□□□□ -1.8
NUP98P52948 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP98P52948 AC073476.4-201ENST00000628409 72 ntBASIC3.79□□□□□ -1.8
NUP98P52948 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP98P52948 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.79□□□□□ -1.8
NUP98P52948 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
NUP98P52948 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUP98P52948 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NUP98P52948 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.79□□□□□ -1.8
NUP98P52948 PRELID3BP6-201ENST00000503839 571 ntBASIC3.79□□□□□ -1.8
NUP98P52948 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.79□□□□□ -1.8
NUP98P52948 AP002404.1-201ENST00000532005 451 ntBASIC3.79□□□□□ -1.8
NUP98P52948 HMGB1P6-201ENST00000569046 646 ntBASIC3.79□□□□□ -1.8
NUP98P52948 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NUP98P52948 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NUP98P52948 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUP98P52948 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NUP98P52948 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUP98P52948 AC000403.1-201ENST00000613696 3585 ntBASIC3.78□□□□□ -1.8
NUP98P52948 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUP98P52948 RNA5SP80-201ENST00000410475 111 ntBASIC3.78□□□□□ -1.8
NUP98P52948 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP98P52948 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP98P52948 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP98P52948 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.78□□□□□ -1.8
NUP98P52948 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.78□□□□□ -1.8
NUP98P52948 MIR4319-201ENST00000577285 85 ntBASIC3.78□□□□□ -1.8
NUP98P52948 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.78□□□□□ -1.8
NUP98P52948 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.78□□□□□ -1.8
NUP98P52948 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NUP98P52948 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NUP98P52948 AC018529.3-201ENST00000624212 2254 ntBASIC3.77□□□□□ -1.81
NUP98P52948 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NUP98P52948 OR5J1P-201ENST00000313544 939 ntBASIC3.77□□□□□ -1.81
NUP98P52948 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NUP98P52948 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.77□□□□□ -1.81
NUP98P52948 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.77□□□□□ -1.81
NUP98P52948 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 FABP5P12-201ENST00000515543 389 ntBASIC3.77□□□□□ -1.81
NUP98P52948 RNA5SP367-201ENST00000516557 118 ntBASIC3.77□□□□□ -1.81
NUP98P52948 AC245100.7-201ENST00000609678 442 ntBASIC3.77□□□□□ -1.81
NUP98P52948 uc_338.1-201ENST00000612113 180 ntBASIC3.77□□□□□ -1.81
NUP98P52948 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 AL137790.1-201ENST00000634283 177 ntBASIC3.77□□□□□ -1.81
NUP98P52948 AC108206.1-201ENST00000570186 4159 ntBASIC3.77□□□□□ -1.81
NUP98P52948 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NUP98P52948 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NUP98P52948 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NUP98P52948 SNORA9.2-201ENST00000365361 133 ntBASIC3.77□□□□□ -1.81
NUP98P52948 MTND4LP20-201ENST00000402379 270 ntBASIC3.77□□□□□ -1.81
NUP98P52948 AC127526.1-201ENST00000417526 366 ntBASIC3.77□□□□□ -1.81
NUP98P52948 DUTP6-201ENST00000425573 462 ntBASIC3.77□□□□□ -1.81
NUP98P52948 CCDC75P1-201ENST00000469247 791 ntBASIC3.77□□□□□ -1.81
NUP98P52948 RPS6P4-201ENST00000494693 758 ntBASIC3.77□□□□□ -1.81
NUP98P52948 COX6CP8-201ENST00000522620 226 ntBASIC3.77□□□□□ -1.81
NUP98P52948 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.77□□□□□ -1.81
NUP98P52948 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.77□□□□□ -1.81
NUP98P52948 MIR3162-201ENST00000581818 82 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms