Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 AC063923.1-201ENST00000478982 1619 ntBASIC3.28□□□□□ -1.88
BRCA2P51587 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BRCA2P51587 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
BRCA2P51587 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.28□□□□□ -1.89
BRCA2P51587 RPS4XP7-201ENST00000406274 780 ntBASIC3.28□□□□□ -1.89
BRCA2P51587 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.28□□□□□ -1.89
BRCA2P51587 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
BRCA2P51587 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
BRCA2P51587 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 ATF1P1-201ENST00000406040 927 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 RPS26P47-201ENST00000427219 348 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCA2P51587 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.27□□□□□ -1.89
BRCA2P51587 RPS26P3-201ENST00000470205 348 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 AC004057.1-201ENST00000485827 348 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 SERPINE4P-201ENST00000554978 281 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 AC044913.1-201ENST00000557200 430 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 DPRXP4-201ENST00000578053 568 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.27□□□□□ -1.89
BRCA2P51587 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 RNA5SP289-201ENST00000362332 137 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCA2P51587 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.27□□□□□ -1.89
BRCA2P51587 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCA2P51587 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCA2P51587 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCA2P51587 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCA2P51587 CR381670.1-201ENST00000624291 1693 ntBASIC3.27□□□□□ -1.89
BRCA2P51587 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
BRCA2P51587 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCA2P51587 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC245517.4-201ENST00000448601 281 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCA2P51587 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 RNU1-112P-201ENST00000364401 164 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC046143.2-201ENST00000609789 160 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
BRCA2P51587 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 MIR489-201ENST00000384923 84 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 HMGB3P18-201ENST00000406327 590 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 FAM103A2P-201ENST00000444122 354 ntBASIC3.26□□□□□ -1.89
BRCA2P51587 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.26□□□□□ -1.89
BRCA2P51587 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCA2P51587 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCA2P51587 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCA2P51587 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
BRCA2P51587 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
BRCA2P51587 RNA5SP21-201ENST00000410917 96 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 AC087499.2-201ENST00000432861 149 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
BRCA2P51587 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 RNA5SP103-201ENST00000459503 118 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 RNA5SP458-201ENST00000516188 119 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 AC026634.1-201ENST00000634369 198 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 RNA5SP508-201ENST00000411327 119 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.25□□□□□ -1.89
BRCA2P51587 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.25□□□□□ -1.89
BRCA2P51587 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.25□□□□□ -1.89
BRCA2P51587 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BRCA2P51587 OR11H5P-201ENST00000554039 926 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 SULT1C2P2-201ENST00000562517 294 ntBASIC3.25□□□□□ -1.89
BRCA2P51587 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.25□□□□□ -1.89
BRCA2P51587 AC006840.1-201ENST00000623069 542 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms