Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.28□□□□□ -1.72
CENPAP49450 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CENPAP49450 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.73
CENPAP49450 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 OR5BR1P-201ENST00000524992 1330 ntBASIC4.27□□□□□ -1.73
CENPAP49450 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CENPAP49450 RNU6-216P-201ENST00000363282 104 ntBASIC4.27□□□□□ -1.73
CENPAP49450 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 AC016769.2-201ENST00000414815 475 ntBASIC4.27□□□□□ -1.73
CENPAP49450 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 AC234779.1-201ENST00000425910 285 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 VDAC1P6-201ENST00000430062 855 ntBASIC4.27□□□□□ -1.73
CENPAP49450 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CENPAP49450 RPL7P28-201ENST00000437739 740 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 H2AFZP5-201ENST00000446960 382 ntBASIC4.27□□□□□ -1.73
CENPAP49450 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.27□□□□□ -1.73
CENPAP49450 HMGB1P21-201ENST00000502313 581 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 AC090071.1-201ENST00000507713 644 ntBASIC4.27□□□□□ -1.73
CENPAP49450 MRPS33P2-201ENST00000507850 322 ntBASIC4.27□□□□□ -1.73
CENPAP49450 STMN1P2-201ENST00000508435 439 ntBASIC4.27□□□□□ -1.73
CENPAP49450 ATP1B1P1-201ENST00000509767 915 ntBASIC4.27□□□□□ -1.73
CENPAP49450 NDUFB4P9-201ENST00000511646 388 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 RNU6-678P-201ENST00000516832 109 ntBASIC4.27□□□□□ -1.73
CENPAP49450 IGKV2D-23-201ENST00000518179 286 ntBASIC4.27□□□□□ -1.73
CENPAP49450 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.27□□□□□ -1.73
CENPAP49450 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.27□□□□□ -1.73
CENPAP49450 RPL21P7-201ENST00000557463 483 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AGGF1P8-201ENST00000562979 1000 ntBASIC4.27□□□□□ -1.73
CENPAP49450 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 AC012435.1-202ENST00000568772 240 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC135628.1-201ENST00000568867 534 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 MIR3176-201ENST00000582210 90 ntBASIC4.27□□□□□ -1.73
CENPAP49450 VN1R90P-201ENST00000595717 726 ntBASIC4.27□□□□□ -1.73
CENPAP49450 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AL049634.3-201ENST00000604968 457 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC112220.3-201ENST00000605502 502 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC124312.4-201ENST00000605533 310 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AL359535.1-201ENST00000612100 1087 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AL392048.1-201ENST00000613946 534 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 AC092650.2-201ENST00000619984 902 ntBASIC4.27□□□□□ -1.73
CENPAP49450 AC140113.4-201ENST00000622087 222 ntBASIC4.27□□□□□ -1.73
CENPAP49450 LINC01739-205ENST00000641890 573 ntBASIC4.27□□□□□ -1.73
CENPAP49450 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CENPAP49450 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CENPAP49450 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.27□□□□□ -1.73
CENPAP49450 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CENPAP49450 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CENPAP49450 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CENPAP49450 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CENPAP49450 AL390862.1-201ENST00000635467 1469 ntBASIC4.26□□□□□ -1.73
CENPAP49450 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CENPAP49450 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 AL391994.1-201ENST00000254724 282 ntBASIC4.26□□□□□ -1.73
CENPAP49450 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CENPAP49450 RNU6-553P-201ENST00000364047 96 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RNU6-657P-201ENST00000383904 107 ntBASIC4.26□□□□□ -1.73
CENPAP49450 SNORD116-1-201ENST00000384335 95 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RNU1-106P-201ENST00000384382 164 ntBASIC4.26□□□□□ -1.73
CENPAP49450 RNU6-441P-201ENST00000384545 106 ntBASIC4.26□□□□□ -1.73
CENPAP49450 Y_RNA.560-201ENST00000384689 102 ntBASIC4.26□□□□□ -1.73
CENPAP49450 DPPA2P3-201ENST00000411853 655 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms