Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.3□□□□□ -1.88
HTTP42858 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HTTP42858 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.3□□□□□ -1.88
HTTP42858 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
HTTP42858 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
HTTP42858 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HTTP42858 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HTTP42858 RNU6-859P-201ENST00000362728 107 ntBASIC3.3□□□□□ -1.88
HTTP42858 RHOT1P2-201ENST00000366423 333 ntBASIC3.3□□□□□ -1.88
HTTP42858 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HTTP42858 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HTTP42858 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.3□□□□□ -1.88
HTTP42858 HMGN2P8-201ENST00000391458 268 ntBASIC3.3□□□□□ -1.88
HTTP42858 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HTTP42858 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.3□□□□□ -1.88
HTTP42858 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HTTP42858 BNIP3P8-201ENST00000597863 560 ntBASIC3.3□□□□□ -1.88
HTTP42858 AC009948.4-201ENST00000604692 675 ntBASIC3.3□□□□□ -1.88
HTTP42858 AC026790.2-201ENST00000606282 430 ntBASIC3.3□□□□□ -1.88
HTTP42858 AC099063.3-201ENST00000642066 185 ntBASIC3.3□□□□□ -1.88
HTTP42858 ELF2P3-201ENST00000445099 1506 ntBASIC3.3□□□□□ -1.88
HTTP42858 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 ATF1P1-201ENST00000406040 927 ntBASIC3.29□□□□□ -1.88
HTTP42858 RPS4XP7-201ENST00000406274 780 ntBASIC3.29□□□□□ -1.88
HTTP42858 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.29□□□□□ -1.88
HTTP42858 AL592295.2-201ENST00000612578 206 ntBASIC3.29□□□□□ -1.88
HTTP42858 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.29□□□□□ -1.88
HTTP42858 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.29□□□□□ -1.88
HTTP42858 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.29□□□□□ -1.88
HTTP42858 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 AL590103.1-201ENST00000434488 307 ntBASIC3.29□□□□□ -1.88
HTTP42858 MIR486-1-201ENST00000612171 68 ntBASIC3.29□□□□□ -1.88
HTTP42858 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HTTP42858 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HTTP42858 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 RPS3AP26-201ENST00000398259 784 ntBASIC3.28□□□□□ -1.88
HTTP42858 OR51A3P-201ENST00000413596 924 ntBASIC3.28□□□□□ -1.88
HTTP42858 AC117434.1-201ENST00000419971 836 ntBASIC3.28□□□□□ -1.88
HTTP42858 AL591806.2-201ENST00000433122 173 ntBASIC3.28□□□□□ -1.88
HTTP42858 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.28□□□□□ -1.88
HTTP42858 RPL7L1P1-201ENST00000448259 785 ntBASIC3.28□□□□□ -1.88
HTTP42858 SNRPGP5-201ENST00000456003 220 ntBASIC3.28□□□□□ -1.88
HTTP42858 AC010468.1-201ENST00000461022 817 ntBASIC3.28□□□□□ -1.88
HTTP42858 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.28□□□□□ -1.88
HTTP42858 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.28□□□□□ -1.88
HTTP42858 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 FAM133CP-201ENST00000332869 704 ntBASIC3.28□□□□□ -1.88
HTTP42858 RNA5SP289-201ENST00000362332 137 ntBASIC3.28□□□□□ -1.88
HTTP42858 AL139039.1-201ENST00000401900 692 ntBASIC3.28□□□□□ -1.88
HTTP42858 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.28□□□□□ -1.88
HTTP42858 AC069499.1-201ENST00000489433 509 ntBASIC3.28□□□□□ -1.88
HTTP42858 AC008837.1-201ENST00000511513 412 ntBASIC3.28□□□□□ -1.88
HTTP42858 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HTTP42858 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HTTP42858 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.28□□□□□ -1.88
HTTP42858 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.28□□□□□ -1.88
HTTP42858 AC117522.3-201ENST00000507974 584 ntBASIC3.28□□□□□ -1.88
HTTP42858 OR7M1P-201ENST00000608946 533 ntBASIC3.28□□□□□ -1.88
HTTP42858 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.89
HTTP42858 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.28□□□□□ -1.89
HTTP42858 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.27□□□□□ -1.89
HTTP42858 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
HTTP42858 MIR93-201ENST00000385024 80 ntBASIC3.27□□□□□ -1.89
HTTP42858 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
HTTP42858 AC105402.1-201ENST00000413336 545 ntBASIC3.27□□□□□ -1.89
HTTP42858 RPS26P15-201ENST00000488067 348 ntBASIC3.27□□□□□ -1.89
HTTP42858 AC112184.1-201ENST00000505179 312 ntBASIC3.27□□□□□ -1.89
HTTP42858 PCBP2P3-201ENST00000509726 843 ntBASIC3.27□□□□□ -1.89
HTTP42858 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.27□□□□□ -1.89
HTTP42858 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HTTP42858 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HTTP42858 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HTTP42858 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.27□□□□□ -1.89
HTTP42858 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.27□□□□□ -1.89
HTTP42858 IGKV2-36-201ENST00000519999 223 ntBASIC3.27□□□□□ -1.89
HTTP42858 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.27□□□□□ -1.89
HTTP42858 AL353600.1-201ENST00000608148 251 ntBASIC3.27□□□□□ -1.89
HTTP42858 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HTTP42858 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HTTP42858 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HTTP42858 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HTTP42858 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HTTP42858 JKAMPP1-201ENST00000413804 919 ntBASIC3.26□□□□□ -1.89
HTTP42858 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.26□□□□□ -1.89
HTTP42858 UBE2D3P1-201ENST00000436669 444 ntBASIC3.26□□□□□ -1.89
HTTP42858 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
HTTP42858 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.26□□□□□ -1.89
HTTP42858 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms