Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC010618.1-201ENST00000469924 477 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 SYPL1P1-201ENST00000473622 768 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXD12P35452 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXD12P35452 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 AC091435.1-201ENST00000505442 584 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXD12P35452 STMN1P2-201ENST00000508435 439 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC093824.1-201ENST00000508796 343 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 MTND1P22-201ENST00000510572 951 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC079395.1-201ENST00000510981 262 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXD12P35452 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXD12P35452 AC005832.3-201ENST00000537929 631 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXD12P35452 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC008687.2-201ENST00000597865 520 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 AC012557.2-201ENST00000605919 418 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC131235.4-201ENST00000609288 620 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AC011939.3-201ENST00000613686 466 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 AC116618.1-201ENST00000634617 774 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 AL442639.1-201ENST00000625030 1899 ntBASIC4.74□□□□□ -1.65
HOXD12P35452 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXD12P35452 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXD12P35452 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXD12P35452 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 OR56B2P-201ENST00000317102 954 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RNA5SP509-201ENST00000364577 119 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RNA5SP479-201ENST00000364858 117 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RNU6-619P-201ENST00000365146 108 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AL357515.1-201ENST00000402967 542 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RN7SKP263-201ENST00000411194 309 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AL161449.1-201ENST00000414531 1199 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 ZNF885P-201ENST00000420174 1098 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 RPS27AP8-201ENST00000452665 445 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 PNPLA4P1-201ENST00000458328 305 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC092754.2-201ENST00000463506 460 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC146507.1-201ENST00000468335 354 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC109327.1-201ENST00000471666 403 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXD12P35452 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC010587.2-201ENST00000511727 448 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RN7SKP277-201ENST00000516895 283 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC105185.1-201ENST00000518705 535 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 AL109766.1-201ENST00000555080 552 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXD12P35452 AC084783.1-201ENST00000565846 910 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 MIR5699-201ENST00000578903 90 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC008782.1-201ENST00000603386 430 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC083899.3-201ENST00000603413 594 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 DUXAP11-201ENST00000603858 526 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC015813.4-201ENST00000610469 179 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC026368.1-201ENST00000614934 690 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 AP005019.3-201ENST00000620418 560 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 AC073530.2-201ENST00000623987 261 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXD12P35452 NMD3P1-201ENST00000439704 1488 ntBASIC4.73□□□□□ -1.65
HOXD12P35452 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXD12P35452 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXD12P35452 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms