Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC091179.3-201ENST00000474761 144 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 RN7SL201P-201ENST00000482306 296 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 AC068531.1-201ENST00000502398 195 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 IGKV3D-31-201ENST00000519131 281 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC8.42□□□□□ -1.06
HOXD11P31277 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 RN7SL381P-201ENST00000577658 298 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 MIR4271-201ENST00000582451 67 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 AC131238.1-201ENST00000617135 328 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 MIR6861-201ENST00000618657 64 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 RPL36AP21-202ENST00000639134 430 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 AC016831.3-201ENST00000446451 1723 ntBASIC8.42□□□□□ -1.06
HOXD11P31277 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXD11P31277 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
HOXD11P31277 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.42□□□□□ -1.06
HOXD11P31277 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC8.42□□□□□ -1.06
HOXD11P31277 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 ADIPOQ-201ENST00000320741 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 AC116096.1-201ENST00000566804 2314 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 AC245060.6-201ENST00000624350 8420 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
HOXD11P31277 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 SNORA63.5-201ENST00000363548 123 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 RNA5SP18-201ENST00000390935 121 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AL135786.1-201ENST00000415892 214 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AC017078.1-201ENST00000416146 368 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AC008134.1-201ENST00000420943 193 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 AC126124.1-201ENST00000426104 185 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.41□□□□□ -1.06
HOXD11P31277 BX276092.4-201ENST00000452056 248 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXD11P31277 RN7SL461P-201ENST00000484915 282 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 IGLV10-67-201ENST00000519446 325 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AC027369.5-201ENST00000533838 755 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXD11P31277 AC119751.8-201ENST00000597032 156 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AL137190.1-201ENST00000603288 282 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 AL022345.2-201ENST00000606307 135 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
HOXD11P31277 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.41□□□□□ -1.06
HOXD11P31277 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXD11P31277 TXLNGY-203ENST00000445715 1915 ntBASIC8.41□□□□□ -1.06
HOXD11P31277 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 AC127459.1-201ENST00000563129 2768 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
HOXD11P31277 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXD11P31277 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXD11P31277 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
HOXD11P31277 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 Y_RNA.17-201ENST00000362433 111 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 RNU6-1285P-201ENST00000363480 105 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 U3.7-201ENST00000363668 216 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 RNY1P1-201ENST00000364372 112 ntBASIC8.4□□□□□ -1.06
HOXD11P31277 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXD11P31277 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXD11P31277 RPSAP1-201ENST00000421328 880 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 288.9 ms