Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL4A5P29400 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL4A5P29400 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL4A5P29400 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
COL4A5P29400 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL4A5P29400 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.67□□□□□ -1.82
COL4A5P29400 OR1S2-201ENST00000302592 978 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.67□□□□□ -1.82
COL4A5P29400 RPL21P112-201ENST00000434403 463 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 AC034159.1-201ENST00000513885 583 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 AC011270.1-201ENST00000558606 583 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 AC007619.2-201ENST00000605743 379 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 AC004832.5-201ENST00000608677 401 ntBASIC3.67□□□□□ -1.82
COL4A5P29400 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
COL4A5P29400 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A5P29400 MIR30E-201ENST00000362104 92 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 AL160275.2-201ENST00000412010 394 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A5P29400 NPM1P29-201ENST00000483112 803 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 EIF5A2P1-201ENST00000564027 460 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A5P29400 AC018552.3-201ENST00000567416 561 ntBASIC3.66□□□□□ -1.82
COL4A5P29400 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A5P29400 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.66□□□□□ -1.82
COL4A5P29400 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL4A5P29400 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A5P29400 DPPA2P2-201ENST00000418220 897 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 BTF3P9-201ENST00000418784 283 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 AL645937.1-202ENST00000421799 937 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 DUTP6-201ENST00000425573 462 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 AC112653.1-201ENST00000443851 386 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.65□□□□□ -1.82
COL4A5P29400 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.65□□□□□ -1.82
COL4A5P29400 CYP2C60P-201ENST00000566088 139 ntBASIC3.65□□□□□ -1.82
COL4A5P29400 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
COL4A5P29400 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.65□□□□□ -1.82
COL4A5P29400 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL4A5P29400 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
COL4A5P29400 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A5P29400 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.65□□□□□ -1.83
COL4A5P29400 AL022322.2-201ENST00000624072 20397 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL4A5P29400 BMS1P22-201ENST00000414726 313 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 TRGV5P-201ENST00000419915 354 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A5P29400 Z99127.3-201ENST00000448158 395 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 AC010307.1-201ENST00000467206 836 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 METTL15P1-201ENST00000481421 1045 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A5P29400 OR4C2P-201ENST00000530855 1064 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.65□□□□□ -1.83
COL4A5P29400 AL034351.1-201ENST00000605288 668 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 AC243829.7-201ENST00000633081 225 ntBASIC3.65□□□□□ -1.83
COL4A5P29400 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
COL4A5P29400 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC096644.4-201ENST00000563417 2912 ntBASIC3.64□□□□□ -1.83
COL4A5P29400 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A5P29400 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A5P29400 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
COL4A5P29400 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A5P29400 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC015871.2-201ENST00000603605 948 ntBASIC3.64□□□□□ -1.83
COL4A5P29400 AL365400.2-201ENST00000605604 902 ntBASIC3.64□□□□□ -1.83
COL4A5P29400 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC099654.11-201ENST00000638857 294 ntBASIC3.64□□□□□ -1.83
COL4A5P29400 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL4A5P29400 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
COL4A5P29400 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL4A5P29400 AC017007.4-201ENST00000503353 1352 ntBASIC3.64□□□□□ -1.83
COL4A5P29400 AC093849.1-201ENST00000563631 2209 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A5P29400 OR13C3-201ENST00000374781 1108 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 RNU1-89P-201ENST00000384592 164 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 RPS24P12-201ENST00000402084 394 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 RPL7P25-201ENST00000404151 721 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 RNU2-52P-201ENST00000410680 190 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 NPM1P24-201ENST00000428039 894 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.63□□□□□ -1.83
COL4A5P29400 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.63□□□□□ -1.83
COL4A5P29400 RNU4-29P-201ENST00000515943 174 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 MYL12AP1-201ENST00000518490 515 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
COL4A5P29400 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL4A5P29400 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A5P29400 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A5P29400 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A5P29400 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.63□□□□□ -1.83
COL4A5P29400 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
COL4A5P29400 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL4A5P29400 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.63□□□□□ -1.83
COL4A5P29400 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms