Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN6P29350 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN6P29350 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN6P29350 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN6P29350 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTPN6P29350 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTPN6P29350 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 SNORD35B-201ENST00000363660 87 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 RNU1-13P-201ENST00000384499 162 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 OR8G2P-201ENST00000412796 908 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AL356095.1-201ENST00000417217 199 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.78□□□□□ -1.8
PTPN6P29350 OR4C10P-201ENST00000434991 931 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 YWHAZP8-201ENST00000436935 731 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 AL096829.2-201ENST00000446582 742 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN6P29350 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN6P29350 RPS27P23-201ENST00000487608 251 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC146944.2-203ENST00000502493 354 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.78□□□□□ -1.8
PTPN6P29350 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN6P29350 AC139495.1-202ENST00000513164 354 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 IGJP1-201ENST00000522682 475 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.78□□□□□ -1.8
PTPN6P29350 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.78□□□□□ -1.8
PTPN6P29350 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.78□□□□□ -1.8
PTPN6P29350 MIR4789-201ENST00000577469 82 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.78□□□□□ -1.8
PTPN6P29350 AC017100.2-201ENST00000584628 355 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN6P29350 AP002906.1-201ENST00000603405 233 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AC007566.2-201ENST00000603642 413 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 AL451044.1-201ENST00000604867 238 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 BNIP3P19-201ENST00000605397 577 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 U73479.1-201ENST00000618062 168 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN6P29350 AL590396.4-201ENST00000636779 956 ntBASIC3.78□□□□□ -1.8
PTPN6P29350 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PTPN6P29350 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN6P29350 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.78□□□□□ -1.81
PTPN6P29350 AL031985.3-201ENST00000565390 2449 ntBASIC3.78□□□□□ -1.81
PTPN6P29350 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 SEPT7P7-201ENST00000420492 1301 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AC107081.3-201ENST00000612715 2034 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTPN6P29350 SNORA60-201ENST00000362396 134 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 RNA5SP515-201ENST00000364570 118 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
PTPN6P29350 U6.112-201ENST00000384129 70 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 RNU11-4P-201ENST00000391149 133 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 IFNNP1-201ENST00000429219 553 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AL513175.1-201ENST00000431492 780 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AL356276.2-201ENST00000435919 558 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AP000949.1-201ENST00000438328 629 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 RPS26P56-201ENST00000444468 240 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN6P29350 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC106872.2-201ENST00000494303 480 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC010342.1-201ENST00000514047 877 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 RNU5A-7P-201ENST00000515979 116 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN6P29350 MTND1P36-201ENST00000522384 936 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC084824.1-201ENST00000550917 1005 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN6P29350 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN6P29350 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN6P29350 AC025627.2-201ENST00000576220 160 ntBASIC3.77□□□□□ -1.81
PTPN6P29350 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms