Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.49□□□□□ -1.37
RXRBP28702 ELOCP7-201ENST00000439968 331 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.49□□□□□ -1.37
RXRBP28702 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.49□□□□□ -1.37
RXRBP28702 ARPC3P2-201ENST00000457786 533 ntBASIC6.49□□□□□ -1.37
RXRBP28702 PSAT1P4-201ENST00000466500 526 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC108078.1-201ENST00000508073 725 ntBASIC6.49□□□□□ -1.37
RXRBP28702 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.49□□□□□ -1.37
RXRBP28702 RN7SKP31-201ENST00000516354 278 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC008802.1-201ENST00000519121 791 ntBASIC6.49□□□□□ -1.37
RXRBP28702 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.49□□□□□ -1.37
RXRBP28702 FAM92A1P1-201ENST00000528023 890 ntBASIC6.49□□□□□ -1.37
RXRBP28702 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.49□□□□□ -1.37
RXRBP28702 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.49□□□□□ -1.37
RXRBP28702 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.49□□□□□ -1.37
RXRBP28702 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.49□□□□□ -1.37
RXRBP28702 AC115286.1-201ENST00000604298 434 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC091979.2-201ENST00000607514 214 ntBASIC6.49□□□□□ -1.37
RXRBP28702 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AL121890.2-201ENST00000617644 465 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 AP005019.3-201ENST00000620418 560 ntBASIC6.49□□□□□ -1.37
RXRBP28702 ATE1-AS1-202ENST00000636460 506 ntBASIC6.49□□□□□ -1.37
RXRBP28702 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.49□□□□□ -1.37
RXRBP28702 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.48□□□□□ -1.37
RXRBP28702 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RXRBP28702 FRG1BP-201ENST00000278882 761 ntBASIC6.48□□□□□ -1.37
RXRBP28702 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 FRG1CP-201ENST00000358464 769 ntBASIC6.48□□□□□ -1.37
RXRBP28702 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.48□□□□□ -1.37
RXRBP28702 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RXRBP28702 MTCO3P40-201ENST00000392516 676 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL022722.2-201ENST00000402519 180 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL590004.1-201ENST00000405321 300 ntBASIC6.48□□□□□ -1.37
RXRBP28702 MIR1302-11-201ENST00000408051 138 ntBASIC6.48□□□□□ -1.37
RXRBP28702 MIR1302-9-201ENST00000408365 138 ntBASIC6.48□□□□□ -1.37
RXRBP28702 MIR1302-10-201ENST00000408734 138 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AC068533.2-201ENST00000411872 306 ntBASIC6.48□□□□□ -1.37
RXRBP28702 RPL17P12-201ENST00000413391 526 ntBASIC6.48□□□□□ -1.37
RXRBP28702 SDCBPP3-201ENST00000419629 891 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 AC069157.1-201ENST00000421749 137 ntBASIC6.48□□□□□ -1.37
RXRBP28702 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.48□□□□□ -1.37
RXRBP28702 FO393419.3-201ENST00000428741 282 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL512649.1-201ENST00000428997 581 ntBASIC6.48□□□□□ -1.37
RXRBP28702 RPS29P17-201ENST00000430795 166 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL050321.1-201ENST00000432363 400 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AC093019.1-201ENST00000443135 252 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AC023512.1-201ENST00000444513 499 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 AC091564.1-201ENST00000464563 479 ntBASIC6.48□□□□□ -1.37
RXRBP28702 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.48□□□□□ -1.37
RXRBP28702 GAPDHP62-201ENST00000515313 990 ntBASIC6.48□□□□□ -1.37
RXRBP28702 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 RNU6-1225P-201ENST00000516336 65 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.48□□□□□ -1.37
RXRBP28702 AP002748.2-201ENST00000528671 348 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.48□□□□□ -1.37
RXRBP28702 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.48□□□□□ -1.37
RXRBP28702 AC020914.6-201ENST00000594327 272 ntBASIC6.48□□□□□ -1.37
RXRBP28702 KC877982.1-201ENST00000602313 470 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AP001429.1-201ENST00000602568 530 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL161729.4-201ENST00000604650 476 ntBASIC6.48□□□□□ -1.37
RXRBP28702 MIR1302-2-201ENST00000607096 138 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AL359535.1-201ENST00000612100 1087 ntBASIC6.48□□□□□ -1.37
RXRBP28702 AP004607.9-201ENST00000618202 316 ntBASIC6.48□□□□□ -1.37
RXRBP28702 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.48□□□□□ -1.37
RXRBP28702 uc_338.7-201ENST00000621834 124 ntBASIC6.48□□□□□ -1.37
RXRBP28702 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.48□□□□□ -1.37
RXRBP28702 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.48□□□□□ -1.37
RXRBP28702 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 AC025574.1-201ENST00000554784 1653 ntBASIC6.48□□□□□ -1.37
RXRBP28702 SALL4P2-201ENST00000423288 2910 ntBASIC6.48□□□□□ -1.37
RXRBP28702 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.48□□□□□ -1.37
RXRBP28702 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RXRBP28702 AC106871.1-201ENST00000568324 3102 ntBASIC6.47□□□□□ -1.37
RXRBP28702 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RXRBP28702 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RXRBP28702 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms