Protein–RNA interactions for Protein: P23467

PTPRB, Receptor-type tyrosine-protein phosphatase beta, humanhuman

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRBP23467 RPS29P31-201ENST00000446147 164 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 RPL7P59-201ENST00000447700 943 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 RPS4XP13-201ENST00000483219 789 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 RWDD4P1-201ENST00000488019 565 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 AC018797.3-201ENST00000513388 1241 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 AC005798.1-201ENST00000513715 387 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRBP23467 RNU6-943P-201ENST00000516960 98 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.13□□□□□ -1.91
PTPRBP23467 OR5AP1P-201ENST00000529730 940 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRBP23467 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRBP23467 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRBP23467 uc_338.32-201ENST00000615087 172 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRBP23467 AC027287.1-201ENST00000553115 1453 ntBASIC3.13□□□□□ -1.91
PTPRBP23467 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRBP23467 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPRBP23467 ATP5C1P1-201ENST00000441945 895 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 AC112492.1-201ENST00000449607 712 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
PTPRBP23467 RPS29P26-201ENST00000477483 171 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 RN7SKP34-201ENST00000516142 244 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 AC006518.1-201ENST00000541449 943 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 AC092868.3-201ENST00000560515 784 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC009101.1-201ENST00000568135 242 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPRBP23467 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPRBP23467 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPRBP23467 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 AC009263.1-201ENST00000441193 1239 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC010374.2-201ENST00000512933 535 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRBP23467 KC877982.1-201ENST00000602313 470 ntBASIC3.12□□□□□ -1.91
PTPRBP23467 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
PTPRBP23467 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPRBP23467 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRBP23467 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTPRBP23467 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTPRBP23467 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRBP23467 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AL121890.1-201ENST00000435457 205 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRBP23467 AC023598.1-201ENST00000472521 361 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 AC069499.1-201ENST00000489433 509 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPRBP23467 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 MTND2P17-201ENST00000550281 688 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPRBP23467 NRBF2P5-201ENST00000603087 788 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRBP23467 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 AC006504.1-201ENST00000562493 3666 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 AC095050.2-201ENST00000510748 1458 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC008725.1-201ENST00000605123 2263 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AL672296.1-201ENST00000427780 2158 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRBP23467 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRBP23467 RNA5SP235-201ENST00000365411 114 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AL357552.1-201ENST00000445254 415 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 MTND2P25-201ENST00000449028 610 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRBP23467 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPRBP23467 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRBP23467 MTCYBP19-201ENST00000517463 1124 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.11□□□□□ -1.91
PTPRBP23467 OR4R3P-201ENST00000525084 838 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRBP23467 DUXAP6-201ENST00000553858 601 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 UBL5P2-201ENST00000583788 219 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRBP23467 AL159169.2-201ENST00000610061 1269 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 AC244205.2-202ENST00000635781 342 ntBASIC3.11□□□□□ -1.91
PTPRBP23467 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPRBP23467 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PTPRBP23467 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms