Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL365400.1-201ENST00000431854 640 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 RPS20P5-201ENST00000434808 360 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC073410.1-201ENST00000435125 589 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AL356276.2-201ENST00000435919 558 ntBASIC6.54□□□□□ -1.36
RFX1P22670 CYCSP12-201ENST00000437729 300 ntBASIC6.54□□□□□ -1.36
RFX1P22670 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 RPS7P3-201ENST00000443360 580 ntBASIC6.54□□□□□ -1.36
RFX1P22670 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX1P22670 CACYBPP2-201ENST00000453625 678 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX1P22670 AC108059.3-201ENST00000456388 214 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX1P22670 AL163973.1-201ENST00000484753 577 ntBASIC6.54□□□□□ -1.36
RFX1P22670 RPL32P9-201ENST00000487963 407 ntBASIC6.54□□□□□ -1.36
RFX1P22670 TRBV5-2-201ENST00000489095 273 ntBASIC6.54□□□□□ -1.36
RFX1P22670 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 AC117522.3-201ENST00000507974 584 ntBASIC6.54□□□□□ -1.36
RFX1P22670 FTH1P21-201ENST00000512179 511 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX1P22670 AC105417.1-201ENST00000514691 285 ntBASIC6.54□□□□□ -1.36
RFX1P22670 SNORD27.1-201ENST00000516319 72 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX1P22670 AC011979.2-201ENST00000527568 352 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC027544.3-201ENST00000535082 757 ntBASIC6.54□□□□□ -1.36
RFX1P22670 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX1P22670 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX1P22670 AC093027.1-201ENST00000546698 429 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX1P22670 AC245517.5-201ENST00000611529 162 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AL512652.1-201ENST00000619006 500 ntBASIC6.54□□□□□ -1.36
RFX1P22670 AL731532.1-201ENST00000623972 4236 ntBASIC6.54□□□□□ -1.36
RFX1P22670 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 IQCB2P-201ENST00000401788 1633 ntBASIC6.54□□□□□ -1.36
RFX1P22670 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 THAP12P4-201ENST00000528321 2266 ntBASIC6.53□□□□□ -1.36
RFX1P22670 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX1P22670 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX1P22670 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 OR1S2-201ENST00000302592 978 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RNU6-996P-201ENST00000365438 107 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RNU4-48P-201ENST00000365559 182 ntBASIC6.53□□□□□ -1.36
RFX1P22670 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RFX1P22670 AL591416.1-201ENST00000404015 867 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AL162578.1-201ENST00000406202 378 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC245096.1-201ENST00000413104 546 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RPSAP35-201ENST00000413753 818 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC127526.1-201ENST00000417526 366 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RPL35AP12-201ENST00000425362 338 ntBASIC6.53□□□□□ -1.36
RFX1P22670 ATP5JP1-201ENST00000431631 322 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AL353597.2-202ENST00000434901 373 ntBASIC6.53□□□□□ -1.36
RFX1P22670 BX679664.2-201ENST00000439282 283 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RPL7P12-201ENST00000446719 750 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC002553.3-201ENST00000453002 341 ntBASIC6.53□□□□□ -1.36
RFX1P22670 YWHAEP1-201ENST00000453697 763 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RPS4XP10-201ENST00000465034 731 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC078785.3-201ENST00000476607 425 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC233702.1-201ENST00000482905 502 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AL139099.1-201ENST00000497398 403 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RN7SL284P-201ENST00000498823 275 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC008638.1-201ENST00000506035 866 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC114781.3-201ENST00000512083 142 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.53□□□□□ -1.36
RFX1P22670 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX1P22670 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX1P22670 AC011611.1-201ENST00000552179 197 ntBASIC6.53□□□□□ -1.36
RFX1P22670 RPL21P12-201ENST00000559810 515 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX1P22670 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX1P22670 AC010928.3-201ENST00000587712 541 ntBASIC6.53□□□□□ -1.36
RFX1P22670 GLUD1P4-201ENST00000590914 418 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC010525.2-201ENST00000590920 195 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX1P22670 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX1P22670 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX1P22670 AC105429.2-201ENST00000610567 517 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC022467.1-201ENST00000614738 749 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC099494.2-201ENST00000623371 978 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX1P22670 RIOK3P1-201ENST00000418778 1528 ntBASIC6.53□□□□□ -1.36
RFX1P22670 AC123769.1-201ENST00000530992 3192 ntBASIC6.53□□□□□ -1.36
RFX1P22670 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFX1P22670 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms