Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 AP001350.1-201ENST00000601906 1524 ntBASIC6.04□□□□□ -1.44
NFKB1P19838 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NFKB1P19838 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 AC104966.1-201ENST00000467010 1464 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 AC091046.3-201ENST00000631455 1574 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 RNU4-66P-201ENST00000365199 138 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 RNA5SP431-201ENST00000410312 120 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 RNA5SP345-201ENST00000410646 108 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 RNU6-1304P-201ENST00000411374 106 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 RPL36AP36-201ENST00000418616 301 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC092832.1-201ENST00000422934 400 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC012075.1-201ENST00000436549 580 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 HMGB3P22-202ENST00000451823 572 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 RNU7-66P-201ENST00000459469 62 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 RPL7AP10-201ENST00000481016 791 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 AC021146.1-201ENST00000511202 716 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 PRMT5P1-201ENST00000514351 598 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 Y_RNA.682-201ENST00000516457 100 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 OR5D15P-201ENST00000531671 942 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.03□□□□□ -1.44
NFKB1P19838 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.03□□□□□ -1.44
NFKB1P19838 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 TXNP4-201ENST00000575018 310 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 AL669831.4-202ENST00000590817 238 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.03□□□□□ -1.44
NFKB1P19838 MIR6780B-201ENST00000610307 79 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 U4.1-201ENST00000620349 87 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 AC099494.2-201ENST00000623371 978 ntBASIC6.03□□□□□ -1.44
NFKB1P19838 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.03□□□□□ -1.44
NFKB1P19838 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NFKB1P19838 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.02□□□□□ -1.45
NFKB1P19838 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 SELENOWP1-201ENST00000322792 252 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 Y_RNA.148-201ENST00000363557 117 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 RNU1-65P-201ENST00000363919 148 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 SNORA51.6-201ENST00000384151 125 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AL356421.1-201ENST00000403255 413 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 PRRC2CP1-201ENST00000404428 159 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 RPS4XP5-201ENST00000419038 768 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 OR4K11P-201ENST00000431829 904 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NFKB1P19838 DNAJC19P5-201ENST00000443295 316 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 AC118758.1-202ENST00000454719 225 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC009963.3-201ENST00000458090 486 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC083904.1-201ENST00000487828 231 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 RN7SKP219-201ENST00000516825 296 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.02□□□□□ -1.45
NFKB1P19838 AP003497.1-201ENST00000528472 562 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 ZNF705CP-201ENST00000530515 889 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 CYCSP28-201ENST00000534284 321 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 OR4K8P-201ENST00000578842 1048 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 MIR4680-201ENST00000580906 66 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 GLUD1P4-201ENST00000590914 418 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms