Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RNA5SP311-201ENST00000411290 116 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC069282.1-201ENST00000411911 526 ntBASIC4.04□□□□□ -1.76
VCLP18206 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.04□□□□□ -1.76
VCLP18206 PGBD4P8-201ENST00000412993 562 ntBASIC4.04□□□□□ -1.76
VCLP18206 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.04□□□□□ -1.76
VCLP18206 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.04□□□□□ -1.76
VCLP18206 RPL36P19-201ENST00000430744 301 ntBASIC4.04□□□□□ -1.76
VCLP18206 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.04□□□□□ -1.76
VCLP18206 AC006011.1-201ENST00000442758 349 ntBASIC4.04□□□□□ -1.76
VCLP18206 Z77249.1-201ENST00000444622 1175 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.04□□□□□ -1.76
VCLP18206 RPL29P29-201ENST00000448725 423 ntBASIC4.04□□□□□ -1.76
VCLP18206 HMGN3P1-201ENST00000453847 193 ntBASIC4.04□□□□□ -1.76
VCLP18206 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.04□□□□□ -1.76
VCLP18206 SNRPGP5-201ENST00000456003 220 ntBASIC4.04□□□□□ -1.76
VCLP18206 RPS15AP1-201ENST00000457423 391 ntBASIC4.04□□□□□ -1.76
VCLP18206 PRDX3P4-201ENST00000470828 747 ntBASIC4.04□□□□□ -1.76
VCLP18206 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
VCLP18206 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.04□□□□□ -1.76
VCLP18206 PTGES3P3-201ENST00000511479 482 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.04□□□□□ -1.76
VCLP18206 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.04□□□□□ -1.76
VCLP18206 AC010342.1-201ENST00000514047 877 ntBASIC4.04□□□□□ -1.76
VCLP18206 RNA5SP315-201ENST00000516340 116 ntBASIC4.04□□□□□ -1.76
VCLP18206 RNA5SP312-201ENST00000517068 116 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC104115.2-201ENST00000523026 687 ntBASIC4.04□□□□□ -1.76
VCLP18206 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
VCLP18206 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.04□□□□□ -1.76
VCLP18206 AC068339.2-201ENST00000534395 618 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.04□□□□□ -1.76
VCLP18206 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.04□□□□□ -1.76
VCLP18206 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.04□□□□□ -1.76
VCLP18206 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.04□□□□□ -1.76
VCLP18206 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VCLP18206 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.04□□□□□ -1.76
VCLP18206 AC079171.1-201ENST00000568788 914 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC104072.1-201ENST00000568817 668 ntBASIC4.04□□□□□ -1.76
VCLP18206 RN7SL600P-201ENST00000581811 299 ntBASIC4.04□□□□□ -1.76
VCLP18206 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCLP18206 AC104662.1-201ENST00000604448 511 ntBASIC4.04□□□□□ -1.76
VCLP18206 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
VCLP18206 AC016542.1-201ENST00000608259 493 ntBASIC4.04□□□□□ -1.76
VCLP18206 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VCLP18206 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCLP18206 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VCLP18206 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.03□□□□□ -1.76
VCLP18206 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCLP18206 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCLP18206 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VCLP18206 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VCLP18206 SNORD35B-201ENST00000363660 87 ntBASIC4.03□□□□□ -1.76
VCLP18206 RNU6-1243P-201ENST00000364028 107 ntBASIC4.03□□□□□ -1.76
VCLP18206 RNU6-353P-201ENST00000364266 108 ntBASIC4.03□□□□□ -1.76
VCLP18206 RNU6-444P-201ENST00000383988 108 ntBASIC4.03□□□□□ -1.76
VCLP18206 MIR16-1-201ENST00000385271 89 ntBASIC4.03□□□□□ -1.76
VCLP18206 FABP12P1-201ENST00000401911 322 ntBASIC4.03□□□□□ -1.76
VCLP18206 TMSB4XP8-201ENST00000402089 135 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC069218.2-201ENST00000411665 344 ntBASIC4.03□□□□□ -1.76
VCLP18206 HSPE1P12-201ENST00000412576 301 ntBASIC4.03□□□□□ -1.76
VCLP18206 TMSB4XP6-201ENST00000415187 135 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC008280.1-201ENST00000418851 412 ntBASIC4.03□□□□□ -1.76
VCLP18206 TMSB4XP1-201ENST00000424567 135 ntBASIC4.03□□□□□ -1.76
VCLP18206 OR5BE1P-201ENST00000425977 939 ntBASIC4.03□□□□□ -1.76
VCLP18206 ATP5HP2-201ENST00000433885 485 ntBASIC4.03□□□□□ -1.76
VCLP18206 BMS1P19-201ENST00000433925 393 ntBASIC4.03□□□□□ -1.76
VCLP18206 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.03□□□□□ -1.76
VCLP18206 RPS7P2-201ENST00000435134 607 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.03□□□□□ -1.76
VCLP18206 AC087879.1-201ENST00000474343 374 ntBASIC4.03□□□□□ -1.76
VCLP18206 AL132838.2-201ENST00000492041 314 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.03□□□□□ -1.76
VCLP18206 AC093755.1-201ENST00000512950 1023 ntBASIC4.03□□□□□ -1.76
VCLP18206 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.03□□□□□ -1.76
VCLP18206 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.03□□□□□ -1.76
VCLP18206 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.03□□□□□ -1.76
VCLP18206 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 RPL23AP87-202ENST00000573039 466 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC012417.1-201ENST00000582307 1039 ntBASIC4.03□□□□□ -1.76
VCLP18206 MIR5684-201ENST00000585074 65 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.03□□□□□ -1.76
VCLP18206 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
VCLP18206 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 AP003476.1-201ENST00000623984 516 ntBASIC4.03□□□□□ -1.76
VCLP18206 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
VCLP18206 OR5BE1P-202ENST00000641168 1176 ntBASIC4.03□□□□□ -1.76
VCLP18206 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VCLP18206 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.03□□□□□ -1.77
VCLP18206 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
VCLP18206 CASC19-261ENST00000641853 1638 ntBASIC4.03□□□□□ -1.77
VCLP18206 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCLP18206 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.02□□□□□ -1.77
VCLP18206 AL122126.1-201ENST00000546905 1318 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms