Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC092104.1-201ENST00000497346 1441 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNRPA1P09661 RNU6-1339P-201ENST00000363574 91 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 SNORD66.1-201ENST00000391230 76 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 TAF9BP1-201ENST00000396646 746 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 GNG5P5-201ENST00000420444 220 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC007435.1-201ENST00000421086 415 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 OR6K4P-201ENST00000423179 955 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AL353706.1-201ENST00000436728 494 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC009263.1-201ENST00000441193 1239 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AP000936.2-201ENST00000447151 681 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AL162151.2-201ENST00000448875 158 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 RPL23AP65-201ENST00000475608 468 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 RPL30P6-201ENST00000475925 342 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 RPL7P18-201ENST00000478965 734 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC073522.1-201ENST00000483312 377 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC105185.1-201ENST00000518705 535 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC090151.1-201ENST00000520784 730 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC008083.2-201ENST00000546707 476 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 DYNLL1P4-201ENST00000549314 266 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC034105.4-201ENST00000568304 277 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.43□□□□□ -1.54
SNRPA1P09661 ISCA1P3-201ENST00000577104 373 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AC080078.2-201ENST00000603766 501 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNRPA1P09661 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.43□□□□□ -1.54
SNRPA1P09661 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNRPA1P09661 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNRPA1P09661 AP005435.3-201ENST00000531260 3198 ntBASIC5.43□□□□□ -1.54
SNRPA1P09661 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.42□□□□□ -1.54
SNRPA1P09661 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SNRPA1P09661 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNRPA1P09661 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNRPA1P09661 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNRPA1P09661 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNRPA1P09661 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.42□□□□□ -1.54
SNRPA1P09661 RN7SKP224-201ENST00000364140 325 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 RNA5SP513-201ENST00000364648 118 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 RNA5SP80-201ENST00000410475 111 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 RN7SKP167-201ENST00000411047 285 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 RPS3AP44-201ENST00000425466 790 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC244035.1-201ENST00000430042 390 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AL591473.1-201ENST00000464297 313 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC068724.1-201ENST00000487100 792 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC104164.2-201ENST00000496953 495 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC111193.1-201ENST00000504097 155 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AC010587.2-201ENST00000511727 448 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 RN7SKP46-201ENST00000515942 234 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 RNU6-416P-201ENST00000516265 103 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.42□□□□□ -1.54
SNRPA1P09661 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 IGJP1-201ENST00000522682 475 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 CYCSP28-201ENST00000534284 321 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNRPA1P09661 AC027807.1-201ENST00000559921 996 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.42□□□□□ -1.54
SNRPA1P09661 RSL24D1P11-201ENST00000591045 491 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AF131215.7-201ENST00000602443 707 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC004987.4-201ENST00000603383 338 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC131235.4-201ENST00000609288 620 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AP000254.1-201ENST00000609934 520 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AL158063.1-201ENST00000615349 536 ntBASIC5.42□□□□□ -1.54
SNRPA1P09661 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms