Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.82□□□□□ -1.8
TPM3P06753 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM3P06753 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.82□□□□□ -1.8
TPM3P06753 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM3P06753 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM3P06753 MIR6820-201ENST00000611508 62 ntBASIC3.82□□□□□ -1.8
TPM3P06753 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TPM3P06753 AC010435.1-201ENST00000623353 1177 ntBASIC3.82□□□□□ -1.8
TPM3P06753 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM3P06753 AC008264.2-201ENST00000610193 3731 ntBASIC3.82□□□□□ -1.8
TPM3P06753 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM3P06753 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM3P06753 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TPM3P06753 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM3P06753 FAM35CP-201ENST00000554755 2470 ntBASIC3.81□□□□□ -1.8
TPM3P06753 DYNLT3P1-201ENST00000378574 347 ntBASIC3.81□□□□□ -1.8
TPM3P06753 RPL32P23-201ENST00000397237 405 ntBASIC3.81□□□□□ -1.8
TPM3P06753 NDUFB4P5-201ENST00000415445 361 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC012498.1-201ENST00000424037 437 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM3P06753 RPL31P20-201ENST00000449593 360 ntBASIC3.81□□□□□ -1.8
TPM3P06753 TPT1P13-201ENST00000449760 499 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM3P06753 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM3P06753 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
TPM3P06753 RPL31P13-201ENST00000484151 370 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM3P06753 RN7SKP141-201ENST00000516167 338 ntBASIC3.81□□□□□ -1.8
TPM3P06753 CDH12P4-201ENST00000517835 295 ntBASIC3.81□□□□□ -1.8
TPM3P06753 CDH12P3-201ENST00000517935 295 ntBASIC3.81□□□□□ -1.8
TPM3P06753 CDH12P1-201ENST00000518435 295 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM3P06753 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM3P06753 MIR4474-201ENST00000579189 78 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM3P06753 AC006557.5-201ENST00000603126 811 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC112503.1-201ENST00000608436 391 ntBASIC3.81□□□□□ -1.8
TPM3P06753 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
TPM3P06753 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM3P06753 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM3P06753 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM3P06753 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM3P06753 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM3P06753 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM3P06753 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 ZNF33CP-201ENST00000432492 2030 ntBASIC3.8□□□□□ -1.8
TPM3P06753 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TPM3P06753 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.8□□□□□ -1.8
TPM3P06753 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 FRG1CP-201ENST00000358464 769 ntBASIC3.8□□□□□ -1.8
TPM3P06753 U3.6-201ENST00000363622 211 ntBASIC3.8□□□□□ -1.8
TPM3P06753 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
TPM3P06753 RPL7P60-201ENST00000397636 735 ntBASIC3.8□□□□□ -1.8
TPM3P06753 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.8□□□□□ -1.8
TPM3P06753 AC004987.3-201ENST00000413879 771 ntBASIC3.8□□□□□ -1.8
TPM3P06753 SDCBPP3-201ENST00000419629 891 ntBASIC3.8□□□□□ -1.8
TPM3P06753 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
TPM3P06753 AL031736.2-201ENST00000426573 787 ntBASIC3.8□□□□□ -1.8
TPM3P06753 ELOCP11-201ENST00000436690 332 ntBASIC3.8□□□□□ -1.8
TPM3P06753 HMGB1P12-201ENST00000438594 598 ntBASIC3.8□□□□□ -1.8
TPM3P06753 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM3P06753 HSPE1P28-201ENST00000443139 211 ntBASIC3.8□□□□□ -1.8
TPM3P06753 ELOCP16-201ENST00000444494 332 ntBASIC3.8□□□□□ -1.8
TPM3P06753 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM3P06753 RN7SL132P-201ENST00000478131 296 ntBASIC3.8□□□□□ -1.8
TPM3P06753 OR5H3P-201ENST00000502817 919 ntBASIC3.8□□□□□ -1.8
TPM3P06753 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM3P06753 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM3P06753 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM3P06753 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM3P06753 AC010615.3-201ENST00000597319 394 ntBASIC3.8□□□□□ -1.8
TPM3P06753 AC090912.3-201ENST00000609775 533 ntBASIC3.8□□□□□ -1.8
TPM3P06753 AP005212.4-201ENST00000614206 710 ntBASIC3.8□□□□□ -1.8
TPM3P06753 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.8□□□□□ -1.8
TPM3P06753 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TPM3P06753 MIR6830-201ENST00000636015 70 ntBASIC3.8□□□□□ -1.8
TPM3P06753 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM3P06753 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM3P06753 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM3P06753 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM3P06753 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM3P06753 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
TPM3P06753 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM3P06753 AC107081.3-201ENST00000612715 2034 ntBASIC3.79□□□□□ -1.8
TPM3P06753 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TPM3P06753 SNORA51.4-201ENST00000364993 124 ntBASIC3.79□□□□□ -1.8
TPM3P06753 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM3P06753 GSTA12P-201ENST00000402398 508 ntBASIC3.79□□□□□ -1.8
TPM3P06753 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
TPM3P06753 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TPM3P06753 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM3P06753 AC244505.4-201ENST00000434905 287 ntBASIC3.79□□□□□ -1.8
TPM3P06753 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.79□□□□□ -1.8
TPM3P06753 SSXP5-201ENST00000443473 287 ntBASIC3.79□□□□□ -1.8
TPM3P06753 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.79□□□□□ -1.8
TPM3P06753 VN1R48P-201ENST00000448149 1036 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms