Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 OR4H6P-202ENST00000603819 340 ntBASIC3.12□□□□□ -1.91
CD74P04233 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 AL021368.1-201ENST00000607490 540 ntBASIC3.12□□□□□ -1.91
CD74P04233 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.12□□□□□ -1.91
CD74P04233 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 AC025016.1-201ENST00000616746 682 ntBASIC3.12□□□□□ -1.91
CD74P04233 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.12□□□□□ -1.91
CD74P04233 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CD74P04233 MTCO1P24-201ENST00000515438 1558 ntBASIC3.12□□□□□ -1.91
CD74P04233 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
CD74P04233 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
CD74P04233 RNA5SP295-201ENST00000362655 121 ntBASIC3.11□□□□□ -1.91
CD74P04233 MIR142-201ENST00000384835 87 ntBASIC3.11□□□□□ -1.91
CD74P04233 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
CD74P04233 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CD74P04233 RPS7P13-201ENST00000413955 498 ntBASIC3.11□□□□□ -1.91
CD74P04233 RPL17P36-201ENST00000420302 549 ntBASIC3.11□□□□□ -1.91
CD74P04233 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 FO393419.3-201ENST00000428741 282 ntBASIC3.11□□□□□ -1.91
CD74P04233 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 RPS27AP12-201ENST00000429552 465 ntBASIC3.11□□□□□ -1.91
CD74P04233 MTCO1P43-201ENST00000431831 488 ntBASIC3.11□□□□□ -1.91
CD74P04233 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
CD74P04233 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 AL500527.1-201ENST00000448532 255 ntBASIC3.11□□□□□ -1.91
CD74P04233 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.11□□□□□ -1.91
CD74P04233 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
CD74P04233 RPL37P6-202ENST00000464216 403 ntBASIC3.11□□□□□ -1.91
CD74P04233 CABYRP1-201ENST00000465493 1045 ntBASIC3.11□□□□□ -1.91
CD74P04233 UQCRHP4-201ENST00000471686 272 ntBASIC3.11□□□□□ -1.91
CD74P04233 RPL23AP44-201ENST00000482216 473 ntBASIC3.11□□□□□ -1.91
CD74P04233 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 AC090071.1-201ENST00000507713 644 ntBASIC3.11□□□□□ -1.91
CD74P04233 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
CD74P04233 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 AP000926.4-201ENST00000527351 454 ntBASIC3.11□□□□□ -1.91
CD74P04233 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.11□□□□□ -1.91
CD74P04233 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 MIR3160-1-201ENST00000577972 85 ntBASIC3.11□□□□□ -1.91
CD74P04233 RN7SL600P-201ENST00000581811 299 ntBASIC3.11□□□□□ -1.91
CD74P04233 MIR3939-201ENST00000582614 106 ntBASIC3.11□□□□□ -1.91
CD74P04233 CBX3P2-202ENST00000583365 535 ntBASIC3.11□□□□□ -1.91
CD74P04233 ZNF92P3-201ENST00000596594 954 ntBASIC3.11□□□□□ -1.91
CD74P04233 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 AC069304.3-201ENST00000603938 1084 ntBASIC3.11□□□□□ -1.91
CD74P04233 AC015849.2-201ENST00000605738 409 ntBASIC3.11□□□□□ -1.91
CD74P04233 AL450270.1-201ENST00000606160 391 ntBASIC3.11□□□□□ -1.91
CD74P04233 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 FAM157B-203ENST00000639350 358 ntBASIC3.11□□□□□ -1.91
CD74P04233 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CD74P04233 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CD74P04233 MTND4P21-201ENST00000453886 1357 ntBASIC3.11□□□□□ -1.91
CD74P04233 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.11□□□□□ -1.91
CD74P04233 ZNF826P-207ENST00000622273 1910 ntBASIC3.11□□□□□ -1.91
CD74P04233 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CD74P04233 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.1□□□□□ -1.91
CD74P04233 AC021755.1-201ENST00000559747 1447 ntBASIC3.1□□□□□ -1.91
CD74P04233 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.1□□□□□ -1.91
CD74P04233 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD74P04233 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
CD74P04233 SNORA7.2-201ENST00000364446 145 ntBASIC3.1□□□□□ -1.91
CD74P04233 SNORA51.2-201ENST00000364595 132 ntBASIC3.1□□□□□ -1.91
CD74P04233 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD74P04233 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CD74P04233 RNA5SP31-201ENST00000411144 127 ntBASIC3.1□□□□□ -1.91
CD74P04233 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.1□□□□□ -1.91
CD74P04233 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD74P04233 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.1□□□□□ -1.91
CD74P04233 XKRYP4-201ENST00000414395 483 ntBASIC3.1□□□□□ -1.91
CD74P04233 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.1□□□□□ -1.91
CD74P04233 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CD74P04233 MTCO3P4-201ENST00000419236 787 ntBASIC3.1□□□□□ -1.91
CD74P04233 ARL2BPP3-201ENST00000421226 480 ntBASIC3.1□□□□□ -1.91
CD74P04233 AL691449.1-201ENST00000426570 421 ntBASIC3.1□□□□□ -1.91
CD74P04233 AL390879.2-203ENST00000426943 1121 ntBASIC3.1□□□□□ -1.91
CD74P04233 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.1□□□□□ -1.91
CD74P04233 NPM1P49-201ENST00000448027 714 ntBASIC3.1□□□□□ -1.91
CD74P04233 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms