Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.91□□□□□ -2.1
APOBP04114 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBP04114 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBP04114 RPL12P26-201ENST00000452430 487 ntBASIC1.91□□□□□ -2.1
APOBP04114 ANXA2P1-201ENST00000505539 926 ntBASIC1.91□□□□□ -2.1
APOBP04114 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.91□□□□□ -2.1
APOBP04114 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 AL590808.1-201ENST00000618696 141 ntBASIC1.91□□□□□ -2.1
APOBP04114 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
APOBP04114 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 TOPORSLP1-201ENST00000467693 2102 ntBASIC1.91□□□□□ -2.1
APOBP04114 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.91□□□□□ -2.1
APOBP04114 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
APOBP04114 PCBP2P3-201ENST00000509726 843 ntBASIC1.91□□□□□ -2.1
APOBP04114 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
APOBP04114 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBP04114 AC074276.2-201ENST00000619891 348 ntBASIC1.91□□□□□ -2.1
APOBP04114 AC064859.1-201ENST00000624741 174 ntBASIC1.91□□□□□ -2.1
APOBP04114 AC138627.1-204ENST00000641894 765 ntBASIC1.91□□□□□ -2.1
APOBP04114 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.91□□□□□ -2.1
APOBP04114 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.91□□□□□ -2.1
APOBP04114 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.91□□□□□ -2.1
APOBP04114 MIR1289-2-201ENST00000408360 111 ntBASIC1.91□□□□□ -2.1
APOBP04114 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC1.91□□□□□ -2.1
APOBP04114 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.91□□□□□ -2.1
APOBP04114 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBP04114 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC1.91□□□□□ -2.1
APOBP04114 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.91□□□□□ -2.1
APOBP04114 RPL23AP23-201ENST00000452590 471 ntBASIC1.91□□□□□ -2.1
APOBP04114 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.91□□□□□ -2.1
APOBP04114 AP003122.3-201ENST00000526316 255 ntBASIC1.91□□□□□ -2.1
APOBP04114 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
APOBP04114 AC006518.1-201ENST00000541449 943 ntBASIC1.91□□□□□ -2.1
APOBP04114 AC017002.4-201ENST00000604721 1525 ntBASIC1.91□□□□□ -2.1
APOBP04114 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
APOBP04114 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC1.9□□□□□ -2.1
APOBP04114 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
APOBP04114 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.9□□□□□ -2.1
APOBP04114 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.9□□□□□ -2.1
APOBP04114 AL669942.2-201ENST00000620352 697 ntBASIC1.9□□□□□ -2.1
APOBP04114 RMST-202ENST00000541282 2099 ntTSL 2 BASIC1.9□□□□□ -2.1
APOBP04114 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
APOBP04114 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
APOBP04114 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC1.9□□□□□ -2.11
APOBP04114 RPS4XP5-202ENST00000449995 1334 ntBASIC1.9□□□□□ -2.11
APOBP04114 MTCO1P9-201ENST00000505577 1534 ntBASIC1.9□□□□□ -2.11
APOBP04114 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.9□□□□□ -2.11
APOBP04114 RNU6-283P-201ENST00000364788 107 ntBASIC1.9□□□□□ -2.11
APOBP04114 OR51A3P-201ENST00000413596 924 ntBASIC1.9□□□□□ -2.11
APOBP04114 AL445528.1-201ENST00000426330 420 ntBASIC1.9□□□□□ -2.11
APOBP04114 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.9□□□□□ -2.11
APOBP04114 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC1.9□□□□□ -2.11
APOBP04114 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.11
APOBP04114 IGKV2-36-201ENST00000519999 223 ntBASIC1.9□□□□□ -2.11
APOBP04114 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 DPRXP4-201ENST00000578053 568 ntBASIC1.9□□□□□ -2.11
APOBP04114 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 AC025811.1-201ENST00000604312 472 ntBASIC1.9□□□□□ -2.11
APOBP04114 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC1.9□□□□□ -2.11
APOBP04114 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC1.9□□□□□ -2.11
APOBP04114 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 WASF1P1-201ENST00000447560 1131 ntBASIC1.9□□□□□ -2.11
APOBP04114 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
APOBP04114 AC104687.1-201ENST00000485829 412 ntBASIC1.9□□□□□ -2.11
APOBP04114 MTND4P2-201ENST00000507767 1203 ntBASIC1.9□□□□□ -2.11
APOBP04114 AP001636.2-201ENST00000525517 696 ntBASIC1.9□□□□□ -2.11
APOBP04114 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC1.9□□□□□ -2.11
APOBP04114 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.9□□□□□ -2.11
APOBP04114 AC015917.1-201ENST00000579654 510 ntBASIC1.9□□□□□ -2.11
APOBP04114 PLCE1P1-201ENST00000622094 305 ntBASIC1.9□□□□□ -2.11
APOBP04114 IGHVIII-44-202ENST00000636235 289 ntBASIC1.9□□□□□ -2.11
APOBP04114 MIR622-201ENST00000638396 96 ntBASIC1.9□□□□□ -2.11
APOBP04114 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
APOBP04114 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
APOBP04114 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 AC027290.2-201ENST00000623210 18662 ntBASIC1.9□□□□□ -2.11
APOBP04114 AC104297.1-201ENST00000393779 870 ntBASIC1.9□□□□□ -2.11
APOBP04114 RPL7P8-201ENST00000411964 730 ntBASIC1.9□□□□□ -2.11
APOBP04114 RPL23AP67-201ENST00000465341 474 ntBASIC1.9□□□□□ -2.11
APOBP04114 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC1.9□□□□□ -2.11
APOBP04114 AC099506.2-201ENST00000623074 221 ntBASIC1.9□□□□□ -2.11
APOBP04114 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOBP04114 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
APOBP04114 MTND4P26-201ENST00000415971 1359 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms