Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
MT-ND1P03886 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 RNU7-140P-201ENST00000459546 60 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AC011276.1-201ENST00000469688 323 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 RN7SL303P-201ENST00000469773 251 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 RN7SL481P-201ENST00000477764 299 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AC108729.1-201ENST00000487812 947 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AC026414.1-201ENST00000504046 698 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.72□□□□□ -1.81
MT-ND1P03886 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 SOD1P3-201ENST00000518682 454 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 MTND2P32-201ENST00000521584 1038 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AF279873.1-201ENST00000523393 313 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 PSMB7P1-201ENST00000556349 514 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.72□□□□□ -1.81
MT-ND1P03886 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.72□□□□□ -1.81
MT-ND1P03886 VN1R79P-201ENST00000593540 513 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.72□□□□□ -1.81
MT-ND1P03886 AL121594.5-201ENST00000631724 573 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 MTCO1P6-201ENST00000481192 1384 ntBASIC3.72□□□□□ -1.81
MT-ND1P03886 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MT-ND1P03886 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
MT-ND1P03886 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
MT-ND1P03886 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
MT-ND1P03886 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 ZNF29P-201ENST00000225587 168 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 OR11H4-201ENST00000315409 1082 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AL355379.1-201ENST00000405542 640 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 RPL7P53-201ENST00000421245 739 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.71□□□□□ -1.82
MT-ND1P03886 RPL21P110-201ENST00000433345 446 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 BTF3P10-201ENST00000433415 495 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 ATP5HP2-201ENST00000433885 485 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.71□□□□□ -1.82
MT-ND1P03886 MTCO1P53-201ENST00000441633 699 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AL590399.6-201ENST00000446396 307 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 SEPT14P24-201ENST00000447236 180 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC005002.1-201ENST00000447458 540 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AL050341.1-201ENST00000447743 313 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 RPL5P32-201ENST00000454085 879 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 RPS20P32-201ENST00000456044 356 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.71□□□□□ -1.82
MT-ND1P03886 RPL7P1-201ENST00000468161 747 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 RPL7P9-201ENST00000468715 747 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AP000893.1-201ENST00000474462 794 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.71□□□□□ -1.82
MT-ND1P03886 AC041039.1-201ENST00000485656 536 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 TMEM248P1-201ENST00000510579 951 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 RNU6-488P-201ENST00000515918 99 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.71□□□□□ -1.82
MT-ND1P03886 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.71□□□□□ -1.82
MT-ND1P03886 MTND1P8-201ENST00000571424 950 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC006270.2-201ENST00000578523 652 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 MIR4509-3-201ENST00000578671 94 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 MIR4509-2-201ENST00000583920 94 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 AC008687.2-201ENST00000597865 520 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 AL365400.2-201ENST00000605604 902 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 AC116651.1-201ENST00000609724 556 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 MIR4509-1-201ENST00000618224 94 ntBASIC3.71□□□□□ -1.82
MT-ND1P03886 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.71□□□□□ -1.82
MT-ND1P03886 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
MT-ND1P03886 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.71□□□□□ -1.82
MT-ND1P03886 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MT-ND1P03886 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
MT-ND1P03886 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
MT-ND1P03886 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 SNORA60-201ENST00000362396 134 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 RNU6-353P-201ENST00000364266 108 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 MIR3074-201ENST00000384885 81 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms