Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFP01375 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFP01375 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFP01375 TGIF1P1-201ENST00000558095 802 ntBASIC3.19□□□□□ -1.9
TNFP01375 RPL21P12-201ENST00000559810 515 ntBASIC3.19□□□□□ -1.9
TNFP01375 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFP01375 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.19□□□□□ -1.9
TNFP01375 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFP01375 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
TNFP01375 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFP01375 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFP01375 MTCO1P14-201ENST00000441695 1559 ntBASIC3.19□□□□□ -1.9
TNFP01375 USP8P1-201ENST00000494673 3183 ntBASIC3.19□□□□□ -1.9
TNFP01375 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFP01375 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFP01375 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFP01375 PHKBP1-201ENST00000450951 1951 ntBASIC3.18□□□□□ -1.9
TNFP01375 ZNF833P-201ENST00000424938 1494 ntBASIC3.18□□□□□ -1.9
TNFP01375 AC007342.7-201ENST00000624610 2337 ntBASIC3.18□□□□□ -1.9
TNFP01375 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFP01375 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
TNFP01375 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TNFP01375 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
TNFP01375 RNU6-146P-201ENST00000384602 108 ntBASIC3.18□□□□□ -1.9
TNFP01375 GSTA8P-201ENST00000404253 637 ntBASIC3.18□□□□□ -1.9
TNFP01375 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFP01375 RANP4-201ENST00000413361 655 ntBASIC3.18□□□□□ -1.9
TNFP01375 MTND4LP13-201ENST00000425022 298 ntBASIC3.18□□□□□ -1.9
TNFP01375 AC127537.2-201ENST00000439258 465 ntBASIC3.18□□□□□ -1.9
TNFP01375 AL671855.1-201ENST00000446875 1203 ntBASIC3.18□□□□□ -1.9
TNFP01375 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
TNFP01375 AP001992.1-205ENST00000462248 379 ntBASIC3.18□□□□□ -1.9
TNFP01375 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
TNFP01375 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFP01375 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFP01375 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFP01375 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFP01375 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFP01375 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.18□□□□□ -1.9
TNFP01375 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.18□□□□□ -1.9
TNFP01375 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFP01375 AC015849.2-201ENST00000605738 409 ntBASIC3.18□□□□□ -1.9
TNFP01375 AC138932.5-201ENST00000617759 563 ntBASIC3.18□□□□□ -1.9
TNFP01375 AC026422.1-201ENST00000623961 452 ntBASIC3.18□□□□□ -1.9
TNFP01375 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFP01375 OR5BR1P-201ENST00000524992 1330 ntBASIC3.18□□□□□ -1.9
TNFP01375 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFP01375 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
TNFP01375 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFP01375 OR1S2-201ENST00000302592 978 ntBASIC3.17□□□□□ -1.9
TNFP01375 NDUFB4P4-201ENST00000404822 243 ntBASIC3.17□□□□□ -1.9
TNFP01375 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.17□□□□□ -1.9
TNFP01375 AC096664.2-201ENST00000411843 406 ntBASIC3.17□□□□□ -1.9
TNFP01375 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFP01375 AC002075.2-201ENST00000425207 252 ntBASIC3.17□□□□□ -1.9
TNFP01375 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFP01375 BX890604.2-201ENST00000427883 474 ntBASIC3.17□□□□□ -1.9
TNFP01375 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
TNFP01375 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFP01375 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFP01375 CASP3P1-201ENST00000446037 609 ntBASIC3.17□□□□□ -1.9
TNFP01375 AC087312.1-201ENST00000471411 480 ntBASIC3.17□□□□□ -1.9
TNFP01375 AL136126.1-201ENST00000473603 402 ntBASIC3.17□□□□□ -1.9
TNFP01375 RNU6-1231P-201ENST00000517185 103 ntBASIC3.17□□□□□ -1.9
TNFP01375 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFP01375 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFP01375 MIR4325-201ENST00000583049 90 ntBASIC3.17□□□□□ -1.9
TNFP01375 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.17□□□□□ -1.9
TNFP01375 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
TNFP01375 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFP01375 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
TNFP01375 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFP01375 AC066616.2-201ENST00000559334 1481 ntBASIC3.16□□□□□ -1.9
TNFP01375 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFP01375 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.16□□□□□ -1.9
TNFP01375 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
TNFP01375 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFP01375 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFP01375 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.16□□□□□ -1.9
TNFP01375 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFP01375 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
TNFP01375 AC021146.1-201ENST00000511202 716 ntBASIC3.16□□□□□ -1.9
TNFP01375 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.16□□□□□ -1.9
TNFP01375 OR4C2P-201ENST00000530855 1064 ntBASIC3.16□□□□□ -1.9
TNFP01375 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFP01375 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFP01375 CYP2C60P-201ENST00000566088 139 ntBASIC3.16□□□□□ -1.9
TNFP01375 AC124312.4-201ENST00000605533 310 ntBASIC3.16□□□□□ -1.9
TNFP01375 AC084036.1-201ENST00000609190 508 ntBASIC3.16□□□□□ -1.9
TNFP01375 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TNFP01375 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFP01375 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFP01375 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFP01375 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFP01375 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms