Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 OR5M2P-201ENST00000529003 936 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC068993.1-201ENST00000546724 589 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC125611.2-201ENST00000551907 647 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 NMNAT1P1-201ENST00000554095 876 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 RPL21P5-201ENST00000554662 472 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AL359212.1-201ENST00000556608 614 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 MIR3682-201ENST00000581338 84 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC005498.1-201ENST00000592125 465 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 NRBF2P5-201ENST00000603087 788 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC009233.1-201ENST00000616477 371 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT4O95628 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC018445.2-201ENST00000622987 260 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC005618.4-201ENST00000625053 554 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CNOT4O95628 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC138915.3-201ENST00000562908 1389 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 SNORA63-201ENST00000363450 132 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 RNU6-483P-201ENST00000384088 108 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 RNU6-1103P-201ENST00000384150 107 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 Y_RNA.529-201ENST00000384586 119 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 Y_RNA.548-201ENST00000384656 105 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 MIR506-201ENST00000384998 124 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 AL390316.1-201ENST00000406279 553 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 Y_RNA.608-201ENST00000410647 95 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AMD1P2-201ENST00000412936 992 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.02□□□□□ -1.61
CNOT4O95628 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 USP9YP36-201ENST00000424581 829 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 RPS27P18-201ENST00000431701 247 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 FCF1P1-201ENST00000432690 571 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 SKP1P1-201ENST00000438081 489 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 GAPDHP58-201ENST00000438477 1006 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 OR6K1P-201ENST00000456766 971 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.02□□□□□ -1.61
CNOT4O95628 POU5F1P7-201ENST00000508759 541 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AC093809.1-201ENST00000509155 340 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.02□□□□□ -1.61
CNOT4O95628 MIR1269B-201ENST00000580405 75 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 MIR4637-201ENST00000582405 84 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 MIR4307-201ENST00000582802 84 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AC018695.5-201ENST00000605872 315 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 PISRT1-201ENST00000626175 531 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT4O95628 OR4G11P-202ENST00000642116 1414 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 AC107081.3-201ENST00000612715 2034 ntBASIC5.02□□□□□ -1.61
CNOT4O95628 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT4O95628 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT4O95628 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms